RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CDNFQ49AH0 187 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SIRPB2Q5JXA9 342 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CLLU1Q5K131 121 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SLC39A4Q6P5W5 647 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 GAREM2Q75VX8 874 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TMCO2Q7Z6W1 182 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FAM124AQ86V42 546 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CNTN4Q8IWV2 1026 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PHACTR4Q8IZ21 702 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM151AQ8N4L1 468 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF676Q8N7Q3 588 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF454Q8N9F8 522 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TTLQ8NG68 377 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FANK1Q8TC84 345 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 GGHQ92820 318 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ZDHHC12Q96GR4 267 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 KCNA7Q96RP8 456 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CD180Q99467 661 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ACBD6Q9BR61 282 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ABCG8Q9H221 673 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 INPP5EQ9NRR6 644 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 IGSF5Q9NSI5 407 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NLE1Q9NVX2 485 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PGAP2Q9UHJ9 254 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FKBPLQ9UIM3 349 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FBXL21Q9UKT6 434 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TIMM13Q9Y5L4 95 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ABHD14A-ACY1A0A1B0GW23 586 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CASTOR2A6NHX0 329 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 LOC730098B7Z3J9 87 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 STMND1H3BQB6 276 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ACOT7O00154 380 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 IMPA2O14732 288 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 BET1O15155 118 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 IRAK2O43187 625 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 B4GALT5O43286 388 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OR1I1O60431 355 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SCGNO76038 276 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 UBXN7O94888 489 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CYB5AP00167 134 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SBK2P0C263 348 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TAL1P17542 331 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MAP3K8P41279 467 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 VEGFCP49767 419 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NDUFV1P49821 464 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SH3BP2P78314 561 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TUBB3Q13509 450 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SLC39A12Q504Y0 691 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DACT2Q5SW24 774 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CORO6Q6QEF8 472 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM205Q6UW68 189 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TRAPPC5Q8IUR0 188 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FBXO16Q8IX29 292 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FAM83FQ8NEG4 500 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MFSD8Q8NHS3 518 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SLC16A10Q8TF71 515 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 HRASLS5Q96KN8 279 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DUSP21Q9H596 190 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SCPEP1Q9HB40 452 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SMCO4Q9NRQ5 59 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DUS2Q9NX74 493 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 HACL1Q9UJ83 578 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OSGIN1Q9UJX0 560 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MRTO4Q9UKD2 239 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TMPRSS11EQ9UL52 423 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 AKAP12Q02952 1782 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MOXD2PA6NHM9 499 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 J3QLW9 94 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ARVCFO00192 962 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NRP1O14786 923 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 MSCO60682 206 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 S1PR4O95977 384 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ADRB1P08588 477 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SRCP12931 536 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF16P17020 682 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF19P17023 458 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PCGF2P35227 344 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NR0B1P51843 470 aaKnown RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ART1P52961 327 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 DUSP4Q13115 394 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PCBP2Q15366 365 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SLC35G1Q2M3R5 365 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NOMO2Q5JPE7 1267 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 KRBOX4Q5JUW0 171 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 NOXRED1Q6NXP6 359 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 KIAA1324Q6UXG2 1013 aaKnown RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 KCTD20Q7Z5Y7 419 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 ISCA2Q86U28 154 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 GHDCQ8N2G8 530 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 PELI3Q8N2H9 469 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 SLC5A8Q8N695 610 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 BEND7Q8N7W2 519 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-203ENST00000456367 B3GNT7Q8NFL0 401 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 DBF4BQ8NFT6 615 aa4.8□□□□□ -1.64
PCDH9-203ENST00000456367 OR2T33Q8NG76 320 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms