RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ELAVL1Q15717 326 aaKnown RBP16.21■□□□□ 0.19
USP39-208ENST00000455732 GPRIN3Q6ZVF9 776 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 GPR180Q86V85 440 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 FAM26EQ8N5C1 309 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 SLC5A8Q8N695 610 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 CATSPER1Q8NEC5 780 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 APOPT1Q96IL0 206 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 CNDP1Q96KN2 507 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 ZNF354BQ96LW1 612 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 GSTO2Q9H4Y5 243 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 MID2Q9UJV3 735 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 ADAM29Q9UKF5 820 aa16.21■□□□□ 0.19
USP39-208ENST00000455732 COPG1Q9Y678 874 aaKnown RBP16.21■□□□□ 0.19
USP39-208ENST00000455732 CDK2AP1O14519 115 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 TMPRSS11DO60235 418 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 EEDO75530 441 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 MYO1DO94832 1006 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 OR4F21O95013 312 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 KRT6AP02538 564 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 KRT6BP04259 564 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 ENO1P06733 434 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 HSD3B1P14060 373 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 HSD3B2P26439 372 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 BUD31P41223 144 aaPredicted RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 KRT6CP48668 564 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 TNFSF10P50591 281 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 HNRNPH2P55795 449 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 ARG2P78540 354 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 IGLV3-21P80748 117 aaPredicted RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 ZNF33BQ06732 778 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 MRPL49Q13405 166 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 ACER2Q5QJU3 275 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 ARMC10Q8N2F6 343 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 CDYL2Q8N8U2 506 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 BANPQ8N9N5 519 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 APCDD1LQ8NCL9 501 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 B3GNT7Q8NFL0 401 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 SELENOMQ8WWX9 145 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 MTFMTQ96DP5 389 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 NPAS2Q99743 824 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 FARSBQ9NSD9 589 aaKnown RBP16.2■□□□□ 0.18
USP39-208ENST00000455732 OXSMQ9NWU1 459 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 PLA2G3Q9NZ20 509 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 AHSPQ9NZD4 102 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 MAP10Q9P2G4 905 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 VTI1BQ9UEU0 232 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 FBXW2Q9UKT8 454 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 ATG4BQ9Y4P1 393 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 ASB4Q9Y574 426 aa16.2■□□□□ 0.18
USP39-208ENST00000455732 A8MUI8 341 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 H3BQF6 201 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 MANBAO00462 879 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 PROM1O43490 865 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 CBX6O95503 412 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 ESRRBO95718 433 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 WDPCPO95876 746 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 PDYNP01213 254 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 FAM58BPP0C7Q3 252 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 CPA3P15088 417 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 PPP2R1BP30154 601 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 TLX1P31314 330 aaPredicted RBP16.19■□□□□ 0.18
USP39-208ENST00000455732 GPR143P51810 404 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 BIKQ13323 160 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 MEP1AQ16819 746 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 RPUSD3Q6P087 351 aaKnown RBP16.19■□□□□ 0.18
USP39-208ENST00000455732 CYP20A1Q6UW02 462 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 FRMD7Q6ZUT3 714 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 PAGE2Q7Z2X7 111 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 CRLF3Q8IUI8 442 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 METTL4Q8N3J2 472 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 AGAP11Q8TF27 550 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 TANKQ92844 425 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 ANKRD9Q96BM1 317 aaPredicted RBP16.19■□□□□ 0.18
USP39-208ENST00000455732 RPF2Q9H7B2 306 aaKnown RBP16.19■□□□□ 0.18
USP39-208ENST00000455732 PNO1Q9NRX1 252 aaKnown RBP16.19■□□□□ 0.18
USP39-208ENST00000455732 STMN3Q9NZ72 180 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 PLLPQ9Y342 182 aa16.19■□□□□ 0.18
USP39-208ENST00000455732 TRAV17A0A0B4J275 112 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 CCDC151A5D8V7 595 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 OR5H15A6NDH6 313 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 FGF17O60258 216 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 LDB3O75112 727 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 NAGLUP54802 743 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 GALNT1Q10472 559 aaPredicted RBP16.18■□□□□ 0.18
USP39-208ENST00000455732 STX4Q12846 297 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 CSTF3Q12996 717 aaKnown RBP16.18■□□□□ 0.18
USP39-208ENST00000455732 NR6A1Q15406 480 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 SGO1Q5FBB7 561 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 LIPMQ5VYY2 423 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 BEST3Q8N1M1 668 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 TMEM132CQ8N3T6 1108 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 KIF2BQ8N4N8 673 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 CCNYL1Q8N7R7 359 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 CCDC63Q8NA47 563 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 OR14A16Q8NHC5 309 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 DAZLQ92904 295 aaKnown RBP16.18■□□□□ 0.18
USP39-208ENST00000455732 VMP1Q96GC9 406 aa16.18■□□□□ 0.18
USP39-208ENST00000455732 MRPL1Q9BYD6 325 aaKnown RBP16.18■□□□□ 0.18
USP39-208ENST00000455732 ALOXE3Q9BYJ1 711 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms