RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ADIPOR1Q96A54 375 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 VPS33AQ96AX1 596 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 MAP3K3Q99759 626 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SLC39A3Q9BRY0 314 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 LMF2Q9BU23 707 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 MAGIXQ9H6Y5 334 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 GAREM1Q9H706 876 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.66□□□□□ -1.66
RIF1-207ENST00000454583 ARL15Q9NXU5 204 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 VNN3Q9NY84 501 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 OPTCQ9UBM4 332 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 NDOR1Q9UHB4 597 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 BAIAP2L1Q9UHR4 511 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 UTS2RQ9UKP6 389 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 DAPP1Q9UN19 280 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 PCDHGA8Q9Y5G5 932 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TCRBV16S1A1N1A0A5B0 115 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SUPT3HB4E1H0 165 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 H0YGG7 62 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 FLRT2O43155 660 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SUPT3HO75486 399 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 NSA2O95478 260 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 CER1O95813 267 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 LINC00032P0C843 101 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 EPB42P16452 691 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 GABRB1P18505 474 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 DDCP20711 480 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 GSK3BP49841 420 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 OR4D2P58180 307 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 ARF3P61204 181 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 Q0VFX4 171 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 BNIP2Q12982 314 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 DOC2BQ14184 412 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SLBPQ14493 270 aaKnown RBP eCLIP4.66□□□□□ -1.66
RIF1-207ENST00000454583 PTGR1Q14914 329 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SPIN4Q56A73 249 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 YOD1Q5VVQ6 348 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SLC30A9Q6PML9 568 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CYP20A1Q6UW02 462 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TMEM64Q6YI46 380 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TIPARPQ7Z3E1 657 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 SERPINA11Q86U17 422 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 HID1Q8IV36 788 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 KRTCAP2Q8N6L1 136 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SNX31Q8N9S9 440 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 KCT2Q8NC54 265 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 BHLHE22Q8NFJ8 381 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 DNAJB8Q8NHS0 232 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 GABPB2Q8TAK5 448 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 MCOLN3Q8TDD5 553 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 ZNF721Q8TF20 911 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 WNT2BQ93097 391 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CNDP2Q96KP4 475 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 CCDC3Q9BQI4 270 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 WFDC6Q9BQY6 131 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SUSD2Q9UGT4 822 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 KCNE5Q9UJ90 142 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 COLEC10Q9Y6Z7 277 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 A0A096LPI6 279 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 OR6C74A6NCV1 312 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 C2orf74A8MZ97 194 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SLC28A1O00337 649 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 HGSO14964 777 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 AKAP10O43572 662 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CEACAM4O75871 244 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CATP04040 527 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 TP53P04637 393 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 ALPLP05186 524 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 FUT4P22083 530 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 HIST1H1TP22492 207 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 HTR1BP28222 390 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 NUDT2P50583 147 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CCR8P51685 355 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 POLR2JP52435 117 aaKnown RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 SHC2P98077 582 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 C1orf61Q13536 156 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 C16orf72Q14CZ0 275 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TMEM44Q2T9K0 475 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 VPS26BQ4G0F5 336 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
RIF1-207ENST00000454583 GARNL3Q5VVW2 1013 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 OR4C11Q6IEV9 310 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 ZNF770Q6IQ21 691 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 KLC3Q6P597 504 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 LINC00114Q6XXX2 140 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TRIM73Q86UV7 250 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CCDC71Q8IV32 467 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 MIER2Q8N344 545 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 FAM47BQ8NA70 645 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 FAM156AQ8NDB6 213 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 PTPMT1Q8WUK0 201 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 ATP6V1E2Q96A05 226 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 MARVELD3Q96A59 401 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 TSNARE1Q96NA8 513 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 SHCBP1LQ9BZQ2 653 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 KLHL4Q9C0H6 718 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 BHLHE41Q9C0J9 482 aaPredicted RBP4.66□□□□□ -1.66
RIF1-207ENST00000454583 OCIAD1Q9NX40 245 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms