RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 TIMMDC1Q9NPL8 285 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 HPF1Q9NWY4 346 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 NINJ2Q9NZG7 142 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 CPSF2Q9P2I0 782 aaKnown RBP11.07□□□□□ -0.64
LINC01287-203ENST00000454441 VTI1BQ9UEU0 232 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 MTRF1LQ9UGC7 380 aaKnown RBP11.07□□□□□ -0.64
LINC01287-203ENST00000454441 ADGRE2Q9UHX3 823 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 ERVK-11Q9UQG0 969 aa11.07□□□□□ -0.64
LINC01287-203ENST00000454441 KLF2Q9Y5W3 355 aaPredicted RBP11.07□□□□□ -0.64
LINC01287-203ENST00000454441 CCDC189A1A4V9 331 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 C17orf105B2RV13 164 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 WWP2O00308 870 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 CDC40O60508 579 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 OR2J2O76002 312 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 SCELO95171 688 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 KLHL2O95198 593 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 TUBB4AP04350 444 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 COX7A2P14406 83 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 GRNP28799 593 aaKnown RBP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 PTGER1P34995 402 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 SMSP52788 366 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 ALDH18A1P54886 795 aaKnown RBP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 PHEXP78562 749 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 SLAMF1Q13291 335 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 WHAMMP3Q1A5X7 153 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 UBAP2Q5T6F2 1119 aaKnown RBP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 DEPDC1Q5TB30 811 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 LIPJQ5W064 366 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 OR4C11Q6IEV9 310 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 XKRXQ6PP77 449 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 IL20RBQ6UXL0 311 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 MDGA2Q7Z553 956 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 GPALPP1Q8IXQ4 340 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 ZNF321PQ8N8H1 164 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 PSD4Q8NDX1 1056 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 SLC2A12Q8TD20 617 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 RGMAQ96B86 450 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 MTERF1Q99551 399 aaKnown RBP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 SORBS1Q9BX66 1292 aaKnown RBP11.06□□□□□ -0.64
LINC01287-203ENST00000454441 VPS11Q9H270 941 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 ACTR8Q9H981 624 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 DMRT3Q9NQL9 472 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 MYOTQ9UBF9 498 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 COPS7AQ9UBW8 275 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 MEMO1Q9Y316 297 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 PCDHGA11Q9Y5H2 935 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 DNAJC13O75165 2243 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 CREBBPQ92793 2442 aa11.06□□□□□ -0.64
LINC01287-203ENST00000454441 LRRC14BA6NHZ5 514 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 TMEM200CA6NKL6 621 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 PLPP1O14494 284 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 PRRG2O14669 202 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 HS6ST1O60243 411 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 FGF17O60258 216 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 KLK8O60259 260 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 OR6B1O95007 311 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ACSL3O95573 720 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ALDOAP04075 364 aaKnown RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 INHBAP08476 426 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 HTR1EP28566 365 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ARL1P40616 181 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 SOX3P41225 446 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 HK2P52789 917 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 RPS13P62277 151 aaKnown RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 RNF4P78317 190 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 GTF2H2Q13888 395 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 PCBP2Q15366 365 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 CPSF6Q16630 551 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 TECRLQ5HYJ1 363 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 GTF2H2CQ6P1K8 395 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 GOLGA7Q7Z5G4 137 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 OR4N5Q8IXE1 308 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 OR8K3Q8NH51 312 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 C16orf52Q8NHV5 167 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 AGAP11Q8TF27 550 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 ANKRD9Q96BM1 317 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 REPS1Q96D71 796 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 DGAT2Q96PD7 388 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 RASL10BQ96S79 203 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 CDC42EP4Q9H3Q1 356 aaKnown RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 RUBCNLQ9H714 662 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 MS4A12Q9NXJ0 267 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 TNPO3Q9Y5L0 923 aaKnown RBP11.05□□□□□ -0.64
LINC01287-203ENST00000454441 IKBKGQ9Y6K9 419 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 PKDREJQ9NTG1 2253 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 CSMD1Q96PZ7 3565 aa11.05□□□□□ -0.64
LINC01287-203ENST00000454441 A0A1B0GTH9 108 aa11.04□□□□□ -0.64
LINC01287-203ENST00000454441 H0YIV9 168 aa11.04□□□□□ -0.64
LINC01287-203ENST00000454441 DYRK3O43781 588 aa11.04□□□□□ -0.64
LINC01287-203ENST00000454441 UGDHO60701 494 aa11.04□□□□□ -0.64
LINC01287-203ENST00000454441 SIX3O95343 332 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms