RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CUL3Q13618 768 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 DDX39BQ13838 428 aaKnown RBP15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 ZNF468Q5VIY5 522 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 ADNP2Q6IQ32 1131 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 OPN5Q6U736 354 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 RGS9BPQ6ZS82 235 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 MRGPRGQ86SM5 289 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 GPR180Q86V85 440 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 AMER2Q8N7J2 671 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 SLC44A1Q8WWI5 657 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 IFT81Q8WYA0 676 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 DGAT2Q96PD7 388 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 CSF3RQ99062 836 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 MAPKAP1Q9BPZ7 522 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 RPF2Q9H7B2 306 aaKnown RBP15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 IPPKQ9H8X2 491 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 CPSF2Q9P2I0 782 aaKnown RBP15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 ZNF180Q9UJW8 692 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 PPT2Q9UMR5 302 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 ASB1Q9Y576 335 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 CLDN16Q9Y5I7 305 aa15.9■□□□□ 0.14
TNFRSF4-202ENST00000453580 GTF3C1Q12789 2109 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 CROCCQ5TZA2 2017 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 A0A087WUV0 522 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 PRSS44E7EML9 344 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 STX16-NPEPL1H3BU86 382 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 ACOT7O00154 380 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 FOXE1O00358 373 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 STX16O14662 325 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 PEX1O43933 1283 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 CLDN9O95484 217 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 ALDOAP04075 364 aaKnown RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 ARL1P40616 181 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 MEOX1P50221 254 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 HNRNPFP52597 415 aaKnown RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 IRF9Q00978 393 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 SLAMF1Q13291 335 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 HIST2H2BCQ6DN03 193 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 CYP20A1Q6UW02 462 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 ZNF793Q6ZN11 406 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 UBE3DQ7Z6J8 389 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 SIAH3Q8IW03 269 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 L3MBTL4Q8NA19 623 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 TMEM52Q8NDY8 209 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 PTPMT1Q8WUK0 201 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 ISL2Q96A47 359 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 CCDC120Q96HB5 630 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 SGCZQ96LD1 299 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 OR8D2Q9GZM6 311 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 OR51B5Q9H339 312 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 CDC42EP4Q9H3Q1 356 aaKnown RBP15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 DMRT3Q9NQL9 472 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 AHSPQ9NZD4 102 aa15.89■□□□□ 0.13
TNFRSF4-202ENST00000453580 HMX2A2RU54 273 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 TGFBR3LH3BV60 316 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 LDB3O75112 727 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 OR2J2O76002 312 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 ACSL3O95573 720 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 COL8A1P27658 744 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 STT3AP46977 705 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 CCNG1P51959 295 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 RNF4P78317 190 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 IGLV3-21P80748 117 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 TNFRSF17Q02223 184 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 RTL4Q6ZR62 310 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 GOLGA7Q7Z5G4 137 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 NUDT13Q86X67 352 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 SULF2Q8IWU5 870 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 DND1Q8IYX4 353 aaKnown RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 CPSF7Q8N684 471 aaKnown RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 ZFP62Q8NB50 900 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 GOLM1Q8NBJ4 401 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 PSD4Q8NDX1 1056 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 C16orf52Q8NHV5 167 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 KIF18AQ8NI77 898 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 SLC2A12Q8TD20 617 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 ITLN2Q8WWU7 325 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 SCYL1Q96KG9 808 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 PAFAH2Q99487 392 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 MTERF1Q99551 399 aaKnown RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 SERPINI1Q99574 410 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 SH3BGRL2Q9UJC5 107 aa15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 ZNF223Q9UK11 482 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF4-202ENST00000453580 CACNA1DQ01668 2161 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 RTCAO00442 366 aaKnown RBP15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 GUCY1B2O75343 617 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 SEMA3DO95025 777 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 C3AR1Q16581 482 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 MPEG1Q2M385 716 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 TECRLQ5HYJ1 363 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 SP5Q6BEB4 398 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 ZNF787Q6DD87 383 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 TTC19Q6DKK2 380 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 GK5Q6ZS86 529 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 PAGE2Q7Z2X7 111 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 LCA5Q86VQ0 697 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 ZNF227Q86WZ6 799 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 SLC15A4Q8N697 577 aa15.87■□□□□ 0.13
TNFRSF4-202ENST00000453580 CEP112Q8N8E3 955 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms