RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KCMF1Q9P0J7 381 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 PCTPQ9UKL6 214 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 NPIPA1Q9UND3 350 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 EXPH5Q8NEV8 1989 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 NCKAP5O14513 1909 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 SMIM23A6NLE4 172 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 A8MT66 165 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 A8MVJ9 347 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 G3V3Y1 287 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 NME2P1O60361 137 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 CDC40O60508 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP54-207ENST00000451492 CTNSO60931 367 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 OR2J2O76002 312 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 SNRPAP09012 282 aaKnown RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 ZNF24P17028 368 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 NME2P22392 152 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 CNTFP26441 200 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 BUD31P41223 144 aaPredicted RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 MEOX1P50221 254 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 CDH13P55290 713 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 PER3P56645 1201 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 TNFRSF17Q02223 184 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 FOLH1Q04609 750 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 RBPJQ06330 500 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 TRAF3Q13114 568 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 IL20RBQ6UXL0 311 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 DGAT2L6Q6ZPD8 337 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 MAMDC2Q7Z304 686 aaPredicted RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 LGI4Q8N135 537 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 OR14A16Q8NHC5 309 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 DNAJB8Q8NHS0 232 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 WDR20Q8TBZ3 569 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 SLC2A12Q8TD20 617 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ASB15Q8WXK1 588 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 DAZLQ92904 295 aaKnown RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 ISL2Q96A47 359 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ANKRD9Q96BM1 317 aaPredicted RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 MAGED4Q96JG8 741 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 HBEGFQ99075 208 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 CNPPD1Q9BV87 410 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 MRPL46Q9H2W6 279 aaKnown RBP9.01□□□□□ -0.97
USP54-207ENST00000451492 ZBTB26Q9HCK0 441 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 HPF1Q9NWY4 346 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ADGRE2Q9UHX3 823 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 PHF11Q9UIL8 331 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ZNF180Q9UJW8 692 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ERVK-11Q9UQG0 969 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 ATG4BQ9Y4P1 393 aa9.01□□□□□ -0.97
USP54-207ENST00000451492 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 A0A1B0GTL3 188 aa9□□□□□ -0.97
USP54-207ENST00000451492 A0A1W2PS29 197 aa9□□□□□ -0.97
USP54-207ENST00000451492 WASHC1A8K0Z3 465 aa9□□□□□ -0.97
USP54-207ENST00000451492 FOXO6A8MYZ6 492 aa9□□□□□ -0.97
USP54-207ENST00000451492 H0YIV9 168 aa9□□□□□ -0.97
USP54-207ENST00000451492 HRKO00198 91 aa9□□□□□ -0.97
USP54-207ENST00000451492 CCL21O00585 134 aa9□□□□□ -0.97
USP54-207ENST00000451492 PPP6CO00743 305 aa9□□□□□ -0.97
USP54-207ENST00000451492 TFECO14948 347 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 TMPRSS11DO60235 418 aa9□□□□□ -0.97
USP54-207ENST00000451492 ZFAND5O76080 213 aa9□□□□□ -0.97
USP54-207ENST00000451492 OR6B1O95007 311 aa9□□□□□ -0.97
USP54-207ENST00000451492 SCELO95171 688 aa9□□□□□ -0.97
USP54-207ENST00000451492 RPS17P08708 135 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 ABHD2P08910 425 aa9□□□□□ -0.97
USP54-207ENST00000451492 NR2F6P10588 404 aa9□□□□□ -0.97
USP54-207ENST00000451492 COX7A2P14406 83 aa9□□□□□ -0.97
USP54-207ENST00000451492 PTX3P26022 381 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 SOX3P41225 446 aa9□□□□□ -0.97
USP54-207ENST00000451492 PIK3CBP42338 1070 aa9□□□□□ -0.97
USP54-207ENST00000451492 HLCSP50747 726 aa9□□□□□ -0.97
USP54-207ENST00000451492 HK2P52789 917 aa9□□□□□ -0.97
USP54-207ENST00000451492 IFT88Q13099 833 aa9□□□□□ -0.97
USP54-207ENST00000451492 SERTAD2Q14140 314 aa9□□□□□ -0.97
USP54-207ENST00000451492 SLC29A2Q14542 456 aa9□□□□□ -0.97
USP54-207ENST00000451492 TERF2Q15554 542 aa9□□□□□ -0.97
USP54-207ENST00000451492 HSDL2Q6YN16 418 aa9□□□□□ -0.97
USP54-207ENST00000451492 NCCRP1Q6ZVX7 275 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 MDGA2Q7Z553 956 aa9□□□□□ -0.97
USP54-207ENST00000451492 MILR1Q7Z6M3 343 aa9□□□□□ -0.97
USP54-207ENST00000451492 GPR180Q86V85 440 aa9□□□□□ -0.97
USP54-207ENST00000451492 ZNF227Q86WZ6 799 aa9□□□□□ -0.97
USP54-207ENST00000451492 NUDT13Q86X67 352 aa9□□□□□ -0.97
USP54-207ENST00000451492 L3MBTL4Q8NA19 623 aa9□□□□□ -0.97
USP54-207ENST00000451492 TRPC4APQ8TEL6 797 aa9□□□□□ -0.97
USP54-207ENST00000451492 PTPMT1Q8WUK0 201 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 UBLCP1Q8WVY7 318 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 UCN3Q969E3 161 aa9□□□□□ -0.97
USP54-207ENST00000451492 GAL3ST4Q96RP7 486 aa9□□□□□ -0.97
USP54-207ENST00000451492 MRPL57Q9BQC6 102 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 MRPL1Q9BYD6 325 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 RPF2Q9H7B2 306 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 LYARQ9NX58 379 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 TEX10Q9NXF1 929 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 TMEM216Q9P0N5 145 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms