RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 A0A0D9SEW6 157 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC22A23A1A5C7 686 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 GLAP06280 429 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR1D2P34982 312 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 SGSHP51688 502 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 CLDN20P56880 219 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 USP7Q93009 1102 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 MAB21L2Q9Y586 359 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 GFRA2O00451 464 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC30A4O14863 429 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC43A1O75387 559 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRKAR1AP10644 381 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF140P52738 457 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 CDH18Q13634 790 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 RTL4Q6ZR62 310 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 RRM2BQ7LG56 351 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 DNAJC22Q8N4W6 341 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 FAM181AQ8N9Y4 354 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR4F6Q8NGB9 312 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 WBP2Q969T9 261 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 HIST1H2AHQ96KK5 128 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 SAMD11Q96NU1 681 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 MGLLQ99685 303 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 HIST1H2AJQ99878 128 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 H2AFJQ9BTM1 129 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 TTYH1Q9H313 450 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 FFAR2O15552 330 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 HRO43593 1189 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 PLOD3O60568 738 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 MPC2O95563 127 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ANXA5P08758 320 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 BTF3P20290 206 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ATP5C1P36542 298 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 CSKP41240 450 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 RPS14P62263 151 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 C2orf80Q0P641 193 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 LRRC74AQ0VAA2 488 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 NPRL3Q12980 569 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 CDKL4Q5MAI5 379 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 BHLHB9Q6PI77 547 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 CSGALNACT1Q8TDX6 532 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 COPZ2Q9P299 210 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 ABCG2Q9UNQ0 655 aa12.88□□□□□ -0.35
SYNGAP1-204ENST00000449372 KRBOX1C9JBD0 128 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 INMT-MINDY4F8WBC2 141 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 GREM1O60565 184 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRMT3O60678 531 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 GLUD1P00367 558 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CR2P20023 1033 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CAPZA2P47755 286 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 MEOX2P50222 304 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ERVPABLB-1P60509 514 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CFAP52Q8N1V2 620 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 LIX1Q8N485 282 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 MARVELD1Q9BSK0 173 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 COA4Q9NYJ1 87 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 E2F3O00716 465 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 RFXANKO14593 260 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CLDN11O75508 207 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 STC2O76061 302 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 SOD2P04179 222 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 RHOCP08134 193 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CCL5P13501 91 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 CDH4P55283 916 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF91Q05481 1191 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ST3GAL4Q11206 333 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 FCN2Q15485 313 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 FAM92BQ6ZTR7 304 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC44A2Q8IWA5 706 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 FAM217AQ8IXS0 508 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 SLC34A3Q8N130 599 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 SIDT2Q8NBJ9 832 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR4D10Q8NGI6 311 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZC3HAV1LQ96H79 300 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 KLF16Q9BXK1 252 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-204ENST00000449372 A0A1W2PQL4 384 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms