RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 FGF17O60258 216 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 SEMA3DO95025 777 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 DDAH2O95865 285 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 GSTA1P08263 222 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 RNF224P0DH78 156 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 EDN3P14138 238 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TSPAN8P19075 237 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 CPN2P22792 545 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 MST1P26927 711 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 CLCN2P51788 898 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 PRKAA2P54646 552 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TAS2R50P59544 299 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 HERVK_113P63132 956 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 OR1C1Q15619 314 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF766Q5HY98 468 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF678Q5SXM1 525 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 LETMD1Q6P1Q0 360 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 BCORP1Q8N888 145 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TANKQ92844 425 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 UCN3Q969E3 161 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 NCLNQ969V3 563 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 SERPINI1Q99574 410 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 CCDC77Q9BR77 488 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 HES7Q9BYE0 225 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ANKRD10Q9NXR5 420 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 ABI3Q9P2A4 366 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 MAP10Q9P2G4 905 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 TBK1Q9UHD2 729 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 DCDC2Q9UHG0 476 aa13.11□□□□□ -0.31
RTFDC1-204ENST00000449062 PCNX1Q96RV3 2341 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 TRBV11-1A0A0K0K1C0 115 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ASPDHA6ND91 283 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 G3V2L1 256 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 OTCP00480 354 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 FAM58BPP0C7Q3 252 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ATP5F1P24539 256 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 HLCSP50747 726 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ID2Q02363 134 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 CLCQ05315 142 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 STX4Q12846 297 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 FHL5Q5TD97 284 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 SLC25A25Q6KCM7 469 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF321PQ8N8H1 164 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 TRPC4APQ8TEL6 797 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 NR4A3Q92570 626 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 FARSBQ9NSD9 589 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 OLAHQ9NV23 265 aa13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ERRFI1Q9UJM3 462 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-204ENST00000449062 ZFAND5O76080 213 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 RASAL1O95294 804 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 GPR75O95800 540 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 UQCRHP07919 91 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 SP1P08047 785 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 TAC1P20366 129 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 STT3AP46977 705 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 RAP1GDS1P52306 607 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 VSNL1P62760 191 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 TBL3Q12788 808 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 BIKQ13323 160 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 FAM180AQ6UWF9 173 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 METTL4Q8N3J2 472 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 C7orf57Q8NEG2 295 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF721Q8TF20 911 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 DAZLQ92904 295 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 L3HYPDHQ96EM0 354 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 SENP5Q96HI0 755 aaPredicted RBP13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 ZNF382Q96SR6 550 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 CENPKQ9BS16 269 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 PPCSQ9HAB8 311 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 LYARQ9NX58 379 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 ADAM29Q9UKF5 820 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
RTFDC1-204ENST00000449062 ITPR2Q14571 2701 aa13.08□□□□□ -0.32
RTFDC1-204ENST00000449062 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms