RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 MMP25Q9NPA2 562 aa23.42■■□□□ 1.34
HTATSF1-203ENST00000448450 PSD3Q9NYI0 1048 aa23.42■■□□□ 1.34
HTATSF1-203ENST00000448450 STMN3Q9NZ72 180 aa23.42■■□□□ 1.34
HTATSF1-203ENST00000448450 CLDN16Q9Y5I7 305 aa23.42■■□□□ 1.34
HTATSF1-203ENST00000448450 CTNSO60931 367 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 GBAP04062 536 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 BSGP35613 385 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ST13P50502 369 aaKnown RBP23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ARG2P78540 354 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ID2Q02363 134 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 SLC18A2Q05940 514 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 CCDC153Q494R4 210 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ABHD17BQ5VST6 288 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 CUZD1Q86UP6 607 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 KIF2BQ8N4N8 673 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 CDYL2Q8N8U2 506 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 L3HYPDHQ96EM0 354 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ZNF717Q9BY31 904 aaPredicted RBP23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ROPN1BQ9BZX4 212 aaPredicted RBP23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 ROPN1Q9HAT0 212 aaPredicted RBP23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 AGPAT4Q9NRZ5 378 aa23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 DIDO1Q9BTC0 2240 aaKnown RBP23.41■■□□□ 1.34
HTATSF1-203ENST00000448450 SAGE2PA6NJ88 616 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 LDB3O75112 727 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 MYO1DO94832 1006 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 PDYNP01213 254 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 IFNA16P05015 189 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 TSFMP43897 325 aaKnown RBP23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 HNRNPH2P55795 449 aaKnown RBP23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 TCHHL1Q5QJ38 904 aaPredicted RBP23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 CYP20A1Q6UW02 462 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 GPRIN3Q6ZVF9 776 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 GPR180Q86V85 440 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 RIBC1Q8N443 379 aaPredicted RBP23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 SELENOMQ8WWX9 145 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 CCDC126Q96EE4 140 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 ZNF382Q96SR6 550 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 BARD1Q99728 777 aaKnown RBP23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 ALOXE3Q9BYJ1 711 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 TRPS1Q9UHF7 1281 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 RAB21Q9UL25 225 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 SNX6Q9UNH7 406 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 ATG4BQ9Y4P1 393 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 PCDHGA10Q9Y5H3 936 aa23.4■■□□□ 1.34
HTATSF1-203ENST00000448450 DYTNA2CJ06 578 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 TMPRSS11DO60235 418 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 PRKRAO75569 313 aaKnown RBP23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 WDPCPO95876 746 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 CPA3P15088 417 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 STX4Q12846 297 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 C18orf63Q68DL7 685 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 H3F3CQ6NXT2 135 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 TRABD2AQ86V40 505 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 OR4N5Q8IXE1 308 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 SRRM1Q8IYB3 904 aaKnown RBP23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 ZCCHC7Q8N3Z6 543 aaKnown RBP23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 MREGQ8N565 214 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 NFAM1Q8NET5 270 aaPredicted RBP23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 MYRIPQ8NFW9 859 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 ZNF354BQ96LW1 612 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 HBEGFQ99075 208 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 GSTO2Q9H4Y5 243 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 DDX31Q9H8H2 851 aaKnown RBP23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 LGALS13Q9UHV8 139 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 TEKT2Q9UIF3 430 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 PPT2Q9UMR5 302 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 SLC12A4Q9UP95 1085 aa23.39■■□□□ 1.33
HTATSF1-203ENST00000448450 MANBAO00462 879 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 MAN1A2O60476 641 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 MLYCDO95822 493 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 ARFIP1P53367 373 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 NAGLUP54802 743 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 LCP2Q13094 533 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 ACER2Q5QJU3 275 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 C10orf62Q5T681 223 aaPredicted RBP23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 CRLF3Q8IUI8 442 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 ST6GALNAC3Q8NDV1 305 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 OR1N1Q8NGS0 311 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 METTL6Q8TCB7 284 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 ELP5Q8TE02 316 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 ZBTB9Q96C00 473 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 NPAS2Q99743 824 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 MRPL1Q9BYD6 325 aaKnown RBP23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 PHF11Q9UIL8 331 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 NTNG1Q9Y2I2 539 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 CPAMD8Q8IZJ3 1885 aa23.38■■□□□ 1.33
HTATSF1-203ENST00000448450 A0A0A6YYD5 115 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 SPAG7O75391 227 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 SEMA3DO95025 777 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 KLK1P06870 262 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 FAM58BPP0C7Q3 252 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 HMOX2P30519 316 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 DEKP35659 375 aaKnown RBP23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 TAS2R50P59544 299 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 ZNF169Q14929 603 aaPredicted RBP23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 TLR1Q15399 786 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 NUDT13Q86X67 352 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 SLC34A3Q8N130 599 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 RDH11Q8TC12 318 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms