RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TMPRSS11DO60235 418 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 FGF17O60258 216 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 OR4F21O95013 312 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 GBAP04062 536 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 FAM58BPP0C7Q3 252 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 TNNI3P19429 210 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 ATP5F1P24539 256 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 CLCN2P51788 898 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 PRKAA2P54646 552 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 VSNL1P62760 191 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 TNFRSF17Q02223 184 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 OC90Q02509 493 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 SRSF11Q05519 484 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 IFT88Q13099 833 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 RASA2Q15283 850 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 OR1C1Q15619 314 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF766Q5HY98 468 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 C10orf62Q5T681 223 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 FHL5Q5TD97 284 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF324BQ6AW86 544 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 CYP20A1Q6UW02 462 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC22A9Q8IVM8 553 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 MYRIPQ8NFW9 859 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 EPS8L3Q8TE67 593 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 THAP3Q8WTV1 239 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 VMP1Q96GC9 406 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 TMEM237Q96Q45 408 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 ELOVL6Q9H5J4 265 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 PPCSQ9HAB8 311 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 PHF11Q9UIL8 331 aa11.88□□□□□ -0.51
PRPF40A-203ENST00000448428 SYNDIG1LA6NDD5 238 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 G3V2L1 256 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 PRKNO60260 465 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 SEMA7AO75326 666 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 SEMA3DO95025 777 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 RASAL1O95294 804 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 PDYNP01213 254 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 KRT15P19012 456 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 TLX1P31314 330 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 IGLV3-21P80748 117 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF227Q86WZ6 799 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 BCORP1Q8N888 145 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF321PQ8N8H1 164 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 MORN4Q8NDC4 146 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 OR2W6PQ8NHA6 318 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 TANKQ92844 425 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 DAZLQ92904 295 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 UCN3Q969E3 161 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 L3HYPDHQ96EM0 354 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 SLX1AQ9BQ83 275 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 MRPL1Q9BYD6 325 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 HES7Q9BYE0 225 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 KLHL1Q9NR64 748 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 OLAHQ9NV23 265 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 LYARQ9NX58 379 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 LRFN1Q9P244 771 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 TRPS1Q9UHF7 1281 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 PCDHGB6Q9Y5F9 930 aa11.87□□□□□ -0.51
PRPF40A-203ENST00000448428 RELNP78509 3460 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SVILO95425 2214 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 TLDC2A0PJX2 215 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 C17orf105B2RV13 164 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 MANBAO00462 879 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 GLRA3O75311 464 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 NEURL1O76050 574 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 ZFAND5O76080 213 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 DDAH2O95865 285 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 PROCP04070 461 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 KLK1P06870 262 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 EDN3P14138 238 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CD46P15529 392 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 TRHRP34981 398 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CRHR1P34998 444 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 BUD31P41223 144 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CCT5P48643 541 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CYB561P49447 251 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 HLCSP50747 726 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 PMP22Q01453 160 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 FOLH1Q04609 750 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 BIKQ13323 160 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 ELOAQ14241 798 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 INAQ16352 499 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 TCHHL1Q5QJ38 904 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 ZYG11AQ6WRX3 759 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 C16orf47Q6ZP98 133 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 DGAT2L6Q6ZPD8 337 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 METTL4Q8N3J2 472 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 CDYL2Q8N8U2 506 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 C7orf57Q8NEG2 295 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 OR14A16Q8NHC5 309 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 DNAJB8Q8NHS0 232 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms