RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 MAPKAP1Q9BPZ7 522 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 ABCG4Q9H172 646 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TMCC2O75069 709 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 CXCL14O95715 111 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 SERPIND1P05546 499 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 KRT8P05787 483 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 RHCEP18577 417 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 CBLP22681 906 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 TGM4P49221 684 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 EIF4HQ15056 248 aaKnown RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 FAM71E1Q6IPT2 247 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 GATAD2AQ86YP4 633 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 OR9A1PQ8NGU1 263 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 RAD9AQ99638 391 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 THSD1Q9NS62 852 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 IL36AQ9UHA7 158 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 CFL2Q9Y281 166 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 ASF1AQ9Y294 204 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 A8MV72 311 aaPredicted RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 PTTG1O95997 202 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 ARAFP10398 606 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TNFSF8P32971 234 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 LIM2P55344 173 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TAP2Q03519 686 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.44
SHC1-210ENST00000448116 TAB1Q15750 504 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 STK11Q15831 433 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 ERAP2Q6P179 960 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 HORMAD2Q8N7B1 307 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TCEANCQ8N8B7 351 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 FAM46DQ8NEK8 389 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 C9orf43Q8TAL5 461 aaPredicted RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 TMEM203Q969S6 136 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 TMEM38AQ9H6F2 299 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
SHC1-210ENST00000448116 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
SHC1-210ENST00000448116 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 E9PQ18 207 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 APOL3O95236 402 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 CTSAP10619 480 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 CASP3P42574 277 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 SLC15A1P46059 708 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 NFE2L1Q14494 772 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 SSX1Q16384 188 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 CRB2Q5IJ48 1285 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 CASP12Q6UXS9 341 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 TMIGD1Q6UXZ0 262 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 IQCF1Q8N6M8 205 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 ST13P5Q8NFI4 369 aaPredicted RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 EXOSC8Q96B26 276 aaKnown RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 CXorf40BQ96DE9 158 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 TXNDC15Q96J42 360 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 UCK2Q9BZX2 261 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 SPHK2Q9NRA0 654 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 TVP23BQ9NYZ1 205 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 KLK4Q9Y5K2 254 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 PCP4L1A6NKN8 68 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 FFAR1O14842 300 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 TFECO14948 347 aaPredicted RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 MFN2O95140 757 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 SYN1P17600 705 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 PTGER1P34995 402 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 RPS19P39019 145 aaKnown RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 GPR1P46091 355 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 EEF1A2Q05639 463 aaKnown RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 ZNF805Q5CZA5 627 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 DCST1Q5T197 706 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 PAQR6Q6TCH4 344 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 RASGRP3Q8IV61 690 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 GOT1L1Q8NHS2 421 aaPredicted RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.449e-7■■■■□ 22.4
SHC1-210ENST00000448116 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 F2RL3Q96RI0 385 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 RC3H2Q9HBD1 1191 aaKnown RBP12.29□□□□□ -0.44
SHC1-210ENST00000448116 TAAR2Q9P1P5 351 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 NOX1Q9Y5S8 564 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 PCM1Q15154 2024 aa12.29□□□□□ -0.44
SHC1-210ENST00000448116 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
SHC1-210ENST00000448116 POP7O75817 140 aaKnown RBP12.28□□□□□ -0.44
SHC1-210ENST00000448116 CXCL10P02778 98 aa12.28□□□□□ -0.44
SHC1-210ENST00000448116 DCDC1P59894 354 aa12.28□□□□□ -0.44
SHC1-210ENST00000448116 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHC1-210ENST00000448116 SEC23BQ15437 767 aa12.28□□□□□ -0.44
SHC1-210ENST00000448116 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
SHC1-210ENST00000448116 WDR53Q7Z5U6 358 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms