RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 BUD31P41223 144 aaPredicted RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 SERPINB4P48594 390 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 CD97P48960 835 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 ST13P50502 369 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 ARFIP1P53367 373 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 MAPK12P53778 367 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 SOX8P57073 446 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 SLC26A5P58743 744 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 C19orf57Q0VDD7 668 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 TBL3Q12788 808 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 NADK2Q4G0N4 442 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 SPDYAQ5MJ70 313 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 CCNYL2Q5T2Q4 361 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 AGAP7PQ5VUJ5 663 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 PLAG1Q6DJT9 500 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 RIPOR1Q6ZS17 1223 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 PAGE2Q7Z2X7 111 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 NUDCD3Q8IVD9 361 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 KIF2BQ8N4N8 673 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 TEX19Q8NA77 164 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 MGARPQ8TDB4 240 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 APIPQ96GX9 242 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 CNDP1Q96KN2 507 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 AGAP4Q96P64 663 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 PAIP2Q9BPZ3 127 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 EBPLQ9BY08 206 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 RPF2Q9H7B2 306 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 KCNK13Q9HB14 408 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 SSU72Q9NP77 194 aaKnown RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 ARGLU1Q9NWB6 273 aaPredicted RBP11.16□□□□□ -0.62
RFC4-208ENST00000447345 NMRK1Q9NWW6 199 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 MS4A12Q9NXJ0 267 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 VPS29Q9UBQ0 182 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 ASB4Q9Y574 426 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 CLDN16Q9Y5I7 305 aa11.16□□□□□ -0.62
RFC4-208ENST00000447345 WASHC1A8K0Z3 465 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 AZIN1O14977 448 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 PCDH7O60245 1069 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 NPHS1O60500 1241 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 DPM1O60762 260 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 CTNSO60931 367 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ZWINTO95229 277 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 UROSP10746 265 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 NEFHP12036 1026 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 TLX1P31314 330 aaPredicted RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 ARRB2P32121 409 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 MAGOHP61326 146 aaKnown RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 FOLH1Q04609 750 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ZNF33BQ06732 778 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 KLRB1Q12918 225 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 MPP2Q14168 576 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 CHI3L2Q15782 390 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 EXT1Q16394 746 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ARL13AQ5H913 290 aaPredicted RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 SH2D4BQ5SQS7 431 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 MRM1Q6IN84 353 aaKnown RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 ISLR2Q6UXK2 745 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 MMP21Q8N119 569 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 CDC26Q8NHZ8 85 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 DOK4Q8TEW6 326 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 PSMF1Q92530 271 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ANKRD9Q96BM1 317 aaPredicted RBP11.15□□□□□ -0.62
RFC4-208ENST00000447345 TRMOQ9BU70 441 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ALOXE3Q9BYJ1 711 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 EPS8L2Q9H6S3 715 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 WDR41Q9HAD4 459 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 TMBIM4Q9HC24 238 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 CSAG2Q9Y5P2 127 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 ACTL7BQ9Y614 415 aa11.15□□□□□ -0.62
RFC4-208ENST00000447345 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
RFC4-208ENST00000447345 TRBV11-1A0A0K0K1C0 115 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 GNG14A0A1W2PPG7 69 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 B8ZZF3 427 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 H3BQF6 201 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 TM9SF1O15321 606 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 PROM1O43490 865 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 SLC28A2O43868 658 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 KLHL41O60662 606 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 LYPLA1O75608 230 aaPredicted RBP11.14□□□□□ -0.63
RFC4-208ENST00000447345 ICAM2P13598 275 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 H2AFXP16104 143 aaPredicted RBP11.14□□□□□ -0.63
RFC4-208ENST00000447345 TNNI3P19429 210 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 ALDH9A1P49189 494 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 AP2B1P63010 937 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 ACSM2AQ08AH3 577 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 MFAP5Q13361 173 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 CRB2Q5IJ48 1285 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 NDUFAF5Q5TEU4 345 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 KANK2Q63ZY3 851 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 ACSM2BQ68CK6 577 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 OR52E8Q6IFG1 317 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 ATG14Q6ZNE5 492 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 DDIASQ8IXT1 998 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 RBMXL3Q8N7X1 1067 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms