RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SCINQ9Y6U3 715 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 IGLV3-12A0A075B6K2 115 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 A0A1W2PP18 115 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SLC5A10A0PJK1 596 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 FAM170AA1A519 330 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 LRP5LA4QPB2 252 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 KLHL33A6NCF5 533 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PES1O00541 588 aaKnown RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 DYNC1I1O14576 645 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PJA2O43164 708 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 AKR1B10O60218 316 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 GLSO94925 669 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ZFPL1O95159 310 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 CLDN9O95484 217 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 POLBP06746 335 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 C8orf89P0DMQ9 161 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 VCLP18206 1134 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 MGAT1P26572 445 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PTPN6P29350 595 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 CCKARP32238 428 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 GTF2H1P32780 548 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 STAT6P42226 847 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SLC6A9P48067 706 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TRPC1P48995 793 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 MXI1P50539 228 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 GTF2A1P52655 376 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SESN3P58005 492 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ENPEPQ07075 957 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PDCLQ13371 301 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 MUM1Q2TAK8 710 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ALS2CLQ60I27 953 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 KRT39Q6A163 491 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 LEG1Q6P5S2 330 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 FAM183BPQ6ZVS7 135 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SLC22A16Q86VW1 577 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 AMZ2Q86W34 360 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SLC26A11Q86WA9 606 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 CREBRFQ8IUR6 639 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TMEM132CQ8N3T6 1108 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 FBXW8Q8N3Y1 598 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 FBXL13Q8NEE6 735 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ZFP28Q8NHY6 868 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 M1APQ8TC57 530 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 NAT14Q8WUY8 206 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PIH1D2Q8WWB5 315 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 KAT5Q92993 513 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TIGD1Q96MW7 591 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 OR2A14Q96R47 310 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 CPXM1Q96SM3 734 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 CYTH2Q99418 400 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TMEM204Q9BSN7 226 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 TRAF4Q9BUZ4 470 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SPATA16Q9BXB7 569 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 BCO1Q9HAY6 547 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 MMP25Q9NPA2 562 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 SEMA4BQ9NPR2 832 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ACSS1Q9NUB1 689 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-205ENST00000447267 FBXO34Q9NWN3 711 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 IL1RAPL1Q9NZN1 696 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 PCDHA13Q9Y5I0 950 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 COX11Q9Y6N1 276 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
SDCBP-205ENST00000447267 ARHGEF33A8MVX0 844 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 TIMM23O14925 209 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CLOCKO15516 846 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 EPB41L2O43491 1005 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 PRAMEF11O60813 436 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 PGLSO95336 258 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 ESRRBO95718 433 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 TGM6O95932 706 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 IL2RGP31785 369 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 UGT2B10P36537 528 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 SPINT3P49223 89 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 YWHAEP62258 255 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 PRKG2Q13237 762 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 P3H1Q32P28 736 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 IQCCQ4KMZ1 466 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CBWD6Q4V339 395 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 BEX5Q5H9J7 111 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CBWD3Q5JTY5 395 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CBWD5Q5RIA9 395 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 WASHC2DQ5SRD0 308 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 FNBP1LQ5T0N5 605 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 NSUN5P2Q63ZY6 315 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 TRNP1Q6NT89 227 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CCDC73Q6ZRK6 1079 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 UNC13DQ70J99 1090 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 INTS8Q75QN2 995 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 SLC26A9Q7LBE3 791 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CYP4Z2PQ8N1L4 340 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 FAM109AQ8N4B1 249 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 KIR3DL3Q8N743 410 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 TTC29Q8NA56 475 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 OR52E1Q8NGJ3 308 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 FLVCR1-AS1Q8TAF5 88 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 METTL21AQ8WXB1 218 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 SGCDQ92629 289 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CAVIN3Q969G5 261 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms