RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 PPP1R3EQ9H7J1 279 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 ELF5Q9UKW6 265 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 A0A0A6YYJ9 748 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 TRBC2A0A5B9 178 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 LINC00862A6NCI5 91 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 CXCL11O14625 94 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 TLX2O43763 284 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 HCN1O60741 890 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 TRIM3O75382 744 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 CLDN7O95471 211 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 ETHE1O95571 254 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 PIPP12273 146 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 PSMA3P25788 255 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 AOAHP28039 575 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 XCR1P46094 333 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 LRRC74AQ0VAA2 488 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
VPS52-212ENST00000445902 MFSD13AQ14CX5 517 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 KLHL22Q53GT1 634 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 ZNF730Q6ZMV8 503 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 IL26Q9NPH9 171 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 PPP2R3BQ9Y5P8 575 aa13.32□□□□□ -0.28
VPS52-212ENST00000445902 GNG14A0A1W2PPG7 69 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 KDELR3O43731 214 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 B4GALT3O60512 393 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 ANXA4P09525 319 aaPredicted RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 ICAM2P13598 275 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 GLULP15104 373 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CD22P20273 847 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 HMGCLP35914 325 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 GSTM5P46439 218 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CCT3P49368 545 aaKnown RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 STK19P49842 368 aaPredicted RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 HBA1P69905 142 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 SEC23BQ15437 767 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CHRNA6Q15825 494 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 ZNF385BQ569K4 471 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CERS6Q6ZMG9 384 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 VPS29Q9UBQ0 182 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 HEPACAM2A8MVW5 462 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 OR10H3O60404 316 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 SLC43A1O75387 559 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 LHCGRP22888 699 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CD79BP40259 229 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 MVDP53602 400 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 FABP5Q01469 135 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 RNF219Q5W0B1 726 aaPredicted RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 LAPTM4BQ86VI4 370 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 NPLOC4Q8TAT6 608 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 CIDECQ96AQ7 238 aaPredicted RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 TMEM43Q9BTV4 400 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 MED28Q9H204 178 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 SPNS1Q9H2V7 528 aa13.31□□□□□ -0.28
VPS52-212ENST00000445902 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
VPS52-212ENST00000445902 M0QZ92 97 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 CHP2O43745 196 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 C6orf47O95873 294 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 LGI1O95970 557 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PAHP00439 452 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 ITGALP20701 1170 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PTX3P26022 381 aaPredicted RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 ACRV1P26436 265 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 NNMTP40261 264 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 ETV3P41162 512 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 LIM2P55344 173 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 RAB8AP61006 207 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 IRF8Q02556 426 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 BCL2L1Q07817 233 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 BOP1Q14137 746 aaKnown RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 NCF4Q15080 339 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 RPS26P11Q5JNZ5 115 aaPredicted RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 UNC5DQ6UXZ4 953 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 VRK3Q8IV63 474 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 VPS37AQ8NEZ2 397 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 GEMIN6Q8WXD5 167 aaKnown RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 RIT1Q92963 219 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 GPR137Q96N19 417 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 NCKAP1Q9Y2A7 1128 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 CDH10Q9Y6N8 788 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PLXNA3P51805 1871 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 MGAT4DA6NG13 374 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PRRG1O14668 218 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 FFAR1O14842 300 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PRKYO43930 277 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 SOX18P35713 384 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 LIMS1P48059 325 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms