RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SPACA6W5XKT8 324 aa16.23■□□□□ 0.19
LIME1-202ENST00000444951 RELNP78509 3460 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 LOC101059948A0A1B0GTJ6 334 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 GLOD5A6NK44 160 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 NPIPB8E9PQR5 432 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 AKAP10O43572 662 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 JRKO75564 520 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 LRATO95237 230 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 IL3P08700 152 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 PRR35P0CG20 571 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 BCKDHAP12694 445 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 SDC1P18827 310 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 TCN2P20062 427 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 TACR1P25103 407 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 ALDH9A1P49189 494 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 DIO3P55073 304 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 NME5P56597 212 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 RAB38P57729 211 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 KCNC4Q03721 635 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 OCA2Q04671 838 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 MAD2L1Q13257 205 aaPredicted RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 VWA2Q5GFL6 755 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 FAM69BQ5VUD6 431 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 C18orf63Q68DL7 685 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 MMP21Q8N119 569 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 CT55Q8WUE5 264 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 GFM2Q969S9 779 aaKnown RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 CATSPER2Q96P56 530 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 CSF3RQ99062 836 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 TEX10Q9NXF1 929 aaPredicted RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 NOP53Q9NZM5 478 aaKnown RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 KCMF1Q9P0J7 381 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 KLHL14Q9P2G3 628 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 ZNF282Q9UDV7 671 aaPredicted RBP16.22■□□□□ 0.19
LIME1-202ENST00000444951 PHF11Q9UIL8 331 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 TMED5Q9Y3A6 229 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 ASB4Q9Y574 426 aa16.22■□□□□ 0.19
LIME1-202ENST00000444951 A0A1W2PR48 441 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 OR2W5A6NFC9 320 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 UBDO15205 165 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 SUV39H1O43463 412 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 SHOX2O60902 331 aaPredicted RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 ALDOCP09972 364 aaKnown RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 G6PDP11413 515 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 NCF2P19878 526 aaPredicted RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 ZNF763Q0D2J5 394 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 C2orf80Q0P641 193 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 MINDY4Q4G0A6 757 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 MRM1Q6IN84 353 aaKnown RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 GALNT18Q6P9A2 607 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 FAM198BQ6UWH4 519 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 OVCH1Q7RTY7 1134 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 SPATA19Q7Z5L4 167 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 TMEM151BQ8IW70 566 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 UCN3Q969E3 161 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 TBC1D20Q96BZ9 403 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 TM4SF18Q96CE8 201 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 C11orf24Q96F05 449 aaPredicted RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 METTL2AQ96IZ6 378 aaKnown RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 SLC45A3Q96JT2 553 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 EGLN2Q96KS0 407 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 CCDC28BQ9BUN5 200 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 SOX17Q9H6I2 414 aaPredicted RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 LYRM4Q9HD34 91 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 MKKSQ9NPJ1 570 aaPredicted RBP16.21■□□□□ 0.19
LIME1-202ENST00000444951 SIRT5Q9NXA8 310 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 CROTQ9UKG9 612 aa16.21■□□□□ 0.19
LIME1-202ENST00000444951 PTPN13Q12923 2485 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 WASHC1A8K0Z3 465 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 NKX2-8O15522 239 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 PROM1O43490 865 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 CNOT3O75175 753 aaKnown RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 GUCY1B2O75343 617 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 AIFM1O95831 613 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 FHP07954 510 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 NR2F6P10588 404 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 TLX1P31314 330 aaPredicted RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 DLSTP36957 453 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 BUD31P41223 144 aaPredicted RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 HNRNPFP52597 415 aaKnown RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 POLE2P56282 527 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 MC1RQ01726 317 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 TNFRSF17Q02223 184 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 MAP7Q14244 749 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 PTGR1Q14914 329 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 RPS6KA2Q15349 733 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 NDUFAF5Q5TEU4 345 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 BORAQ6PGQ7 559 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 ZC3H7AQ8IWR0 971 aaKnown RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 ENDOVQ8N8Q3 282 aaKnown RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 TMEM52Q8NDY8 209 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 STT3BQ8TCJ2 826 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 C10orf82Q8WW14 230 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 MIEF2Q96C03 454 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 CCT8L2Q96SF2 557 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms