RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 IWS1Q96ST2 819 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 IL12RB2Q99665 862 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 PKP2Q99959 881 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 UPF3AQ9H1J1 476 aaKnown RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 FNDC4Q9H6D8 234 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 LEF1Q9UJU2 399 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 NCKAP1Q9Y2A7 1128 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 WIPI2Q9Y4P8 454 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 PRSS21Q9Y6M0 314 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 DDX49Q9Y6V7 483 aaKnown RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 RGPD5Q99666 1765 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 C5P01031 1676 aa3.78□□□□□ -1.81
HMGB3P6-201ENST00000444896 CPDO75976 1380 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 PCDH11XQ9BZA7 1347 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 COL18A1P39060 1754 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 MEGF6O75095 1541 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 LOC105371242A0A075B767 164 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 KPNA7A9QM74 516 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 RNF103O00237 685 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 SCO2O43819 266 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 SORBS2O94875 1100 aaKnown RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 MBD3O95983 291 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 PDHA2P29803 388 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 MAGEB1P43366 347 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMEM50BP56557 158 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 ST8SIA6P61647 398 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 FKBP1BP68106 108 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 RPP38P78345 283 aaKnown RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 DHODHQ02127 395 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 LY6DQ14210 128 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 GRB14Q14449 540 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 LRRC37A5PQ49AS3 106 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 SPANXN4Q5MJ08 99 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 FAAP20Q6NZ36 180 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM65Q6PJ69 517 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 C15orf52Q6ZUT6 534 aaKnown RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 SYCP3Q8IZU3 236 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 AQP11Q8NBQ7 271 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 UBLCP1Q8WVY7 318 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TEKT1Q969V4 418 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATP6V1E2Q96A05 226 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 SYAP1Q96A49 352 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM44Q96DX7 344 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 C17orf62Q9BQA9 187 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM51Q9BSJ1 452 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 ACPTQ9BZG2 426 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 NACAP1Q9BZK3 213 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 C2orf40Q9H1Z8 148 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 B3GAT2Q9NPZ5 323 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 GPR173Q9NS66 373 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 PDRG1Q9NUG6 133 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 DNAJC17Q9NVM6 304 aaKnown RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMOD3Q9NYL9 352 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 CNIH4Q9P003 139 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 LNPEPQ9UIQ6 1025 aa3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 KDM6AO15550 1401 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P6-201ENST00000444896 RFX7Q2KHR2 1363 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 A0A1B0GU03 582 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 hCG_38984A0A1B0GV85 526 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 NKX6-3A6NJ46 265 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 LMO7DNF2Z398 122 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 K7EQD1 137 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 IDH3BO43837 385 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 NXPH4O95158 308 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 TBX6O95947 436 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 PSMA5P28066 241 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ASIC1P78348 528 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ARHGAP1Q07960 439 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC173Q0VFZ6 552 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLMAPQ14BN4 828 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 FASTKD3Q14CZ7 662 aaKnown RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 PPA1Q15181 289 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 KBTBD12Q3ZCT8 623 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 C2CD6Q53TS8 623 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ARMCX4Q5H9R4 360 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 SIGLEC15Q6ZMC9 328 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZER1Q7Z7L7 766 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 SIAH3Q8IW03 269 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 DND1Q8IYX4 353 aaKnown RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC185Q8N715 623 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 Q8NBF4 154 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 CHURC1Q8WUH1 139 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF689Q96CS4 500 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATXN7L3BQ96GX2 97 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 AGAP3Q96P47 875 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 AGAP4Q96P64 663 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 VGLL1Q99990 258 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF559Q9BR84 538 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 PAPOLGQ9BWT3 736 aaKnown RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 FUT8Q9BYC5 575 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC39A8Q9C0K1 460 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 ALDH8A1Q9H2A2 487 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 DPEP2Q9H4A9 486 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 TEX10Q9NXF1 929 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 NDE1Q9NXR1 346 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 NUDT4Q9NZJ9 180 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 THAP10Q9P2Z0 257 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 FBXL5Q9UKA1 691 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms