RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SYCE2Q6PIF2 218 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 AKAP14Q86UN6 197 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 ZNF615Q8N8J6 731 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
FN1-211ENST00000443816 DIO2Q92813 273 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 TMEM74Q96NL1 305 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 XKR8Q9H6D3 395 aa10.78□□□□□ -0.68
FN1-211ENST00000443816 FABP12A6NFH5 140 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 POLR1CO15160 346 aaPredicted RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 AHCYL1O43865 530 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ARL6IP5O75915 188 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 LPAL2Q16609 132 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ATOH1Q92858 354 aaPredicted RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 NXPE3Q969Y0 559 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 MAPKAP1Q9BPZ7 522 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 GORASP1Q9BQQ3 440 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ZNF559Q9BR84 538 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ENTPD2Q9Y5L3 495 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 UNC13CQ8NB66 2214 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 C11orf98E9PRG8 122 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 OR12D1P0DN82 309 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 RBM34P42696 430 aaKnown RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 MZT1Q08AG7 82 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 FADDQ13158 208 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 RBM20Q5T481 1227 aaKnown RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 DCAF12L1Q5VU92 463 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 KCTD18Q6PI47 426 aaPredicted RBP10.77□□□□□ -0.68
FN1-211ENST00000443816 FIGLAQ6QHK4 219 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ABHD5Q8WTS1 349 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 PEX11GQ96HA9 241 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 GAL3ST1Q99999 423 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 MARCH7Q9H992 704 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 MGAT4BQ9UQ53 548 aa10.77□□□□□ -0.68
FN1-211ENST00000443816 FEZF1A0PJY2 475 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 ORC5O43913 435 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CPNE6O95741 557 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 S100A9P06702 114 aaKnown RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 G6PDP11413 515 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 UFM1P61960 85 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CYBRD1Q53TN4 286 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 ZNF648Q5T619 568 aaPredicted RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 PRAMEF17Q5VTA0 474 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 SCAMP4Q969E2 229 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 C12orf65Q9H3J6 166 aaKnown RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 PCDHGA6Q9Y5G7 932 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 SCN2AQ99250 2005 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CXorf49A8MYA2 514 aaPredicted RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 EIF3FO00303 357 aaPredicted RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 F8A1P23610 371 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 GRIA1P42261 906 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 DGKQP52824 942 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 SRYQ05066 204 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 SCAPQ12770 1279 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 ACVR1CQ8NER5 493 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 ELP5Q8TE02 316 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 MRGPRX2Q96LB1 330 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 AJAP1Q9UKB5 411 aaPredicted RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 MTCL1Q9Y4B5 1905 aaKnown RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 M0QX08 132 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 BEST1O76090 585 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 S1PR4O95977 384 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 H2BFMP0C1H6 154 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CBLP22681 906 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 TNFSF4P23510 183 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 HOXC13P31276 330 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 TIA1P31483 386 aaKnown RBP eCLIP10.77□□□□□ -0.698e-7■■■■□ 22.4
FN1-211ENST00000443816 BDH1Q02338 343 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 ANKRD26P1Q6NSI1 321 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 LAS2Q8IYD9 372 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 FKBP10Q96AY3 582 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 KIR2DS5A0A0G2JLQ3 304 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 A0A0G2JNG1 304 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 KIR2DS3K7RE56 304 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CBFA2T3O75081 653 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 IFI30P13284 250 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 KIR2DS5Q14953 304 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 TYSND1Q2T9J0 566 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 CENPSQ8N2Z9 138 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 SLC5A8Q8N695 610 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 FGF13Q92913 245 aa10.77□□□□□ -0.69
FN1-211ENST00000443816 S100A16Q96FQ6 103 aaKnown RBP10.77□□□□□ -0.69
FN1-211ENST00000443816 PLD2O14939 933 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 VILLO15195 856 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 GLP1RP43220 463 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 ZNF234Q14588 700 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 MLC1Q15049 377 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 C4orf46Q504U0 113 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 TXNRD3NBQ6F5E7 133 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 ARHGAP22Q7Z5H3 698 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 ZNF283Q8N7M2 679 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 SHKBP1Q8TBC3 707 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 ITGB1BP2Q9UKP3 347 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 BCORQ6W2J9 1755 aa10.76□□□□□ -0.69
FN1-211ENST00000443816 TRIM64BA6NI03 449 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms