RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 EPHX2P34913 555 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 ANTXR2P58335 489 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 HNRNPA0Q13151 305 aaKnown RBP5.39□□□□□ -1.55
PTPRC-209ENST00000442510 SEMA3BQ13214 749 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 SLC10A1Q14973 349 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 ZNF571Q7Z3V5 609 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-209ENST00000442510 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 SERPINA12Q8IW75 414 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 OR13C3Q8NGS6 347 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 OR8U1Q8NH10 309 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 CNOT9Q92600 299 aaKnown RBP5.39□□□□□ -1.55
PTPRC-209ENST00000442510 SLC45A3Q96JT2 553 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 NT5C1AQ9BXI3 368 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 OR11A1Q9GZK7 315 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 PCDHB10Q9UN67 800 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 TBC1D30Q9Y2I9 924 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 MEMO1Q9Y316 297 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 PLEKHM1Q9Y4G2 1056 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 PCDHB9Q9Y5E1 797 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 KDM5CP41229 1560 aa5.39□□□□□ -1.55
PTPRC-209ENST00000442510 TCHHQ07283 1943 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 FAM220BPB1ANY3 271 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 CCSO14618 274 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 KLF11O14901 512 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 DPM1O60762 260 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 RBBP9O75884 186 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SEC14L2O76054 403 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TSPAN12O95859 305 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 LRG1P02750 347 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 OR10J4P0C629 311 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TBXA2RP21731 343 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 RAP2BP61225 183 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 RPS8P62241 208 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TAF13Q15543 124 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TARBP2Q15633 366 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ELOA3BQ3SY89 546 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ATXN7L2Q5T6C5 722 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SAMD13Q5VXD3 122 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 REP15Q6BDI9 236 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 GAREM2Q75VX8 874 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ZNF765Q7L2R6 523 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 GPAT4Q86UL3 456 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 FBXO11Q86XK2 927 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 DENND1CQ8IV53 801 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 MS4A15Q8N5U1 240 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TTLL6Q8N841 843 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ELOA3Q8NG57 546 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 OR8D4Q8NGM9 314 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 GLYATL2Q8WU03 294 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 FAM3CQ92520 227 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 MOAP1Q96BY2 351 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 REEP6Q96HR9 211 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 FBXL18Q96ME1 805 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 P2RY13Q9BPV8 354 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 POLR2J2Q9GZM3 115 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TMEM117Q9H0C3 514 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 MTIF3Q9H2K0 278 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 WDR55Q9H6Y2 383 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ZDHHC11Q9H8X9 412 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 RBFOX1Q9NWB1 397 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 GAB2Q9UQC2 676 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 A3GALT2U3KPV4 340 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 TIAM1Q13009 1591 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF27A3QJZ7 478 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF25A6NGN4 478 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF26H0Y7S4 382 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 CYR61O00622 381 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SOCS2O14508 198 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 UBFD1O14562 309 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SURF4O15260 269 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF4O60810 478 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF11O60813 436 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 MT-ND4LP03901 98 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 MMP2P08253 660 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ATP5A1P25705 553 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 GPX4P36969 197 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SCNN1AP37088 669 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 CSNK1DP48730 415 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 HSPA7P48741 367 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 EPHA4P54764 986 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 SCAND1P57086 179 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PTSQ03393 145 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ACSM1Q08AH1 577 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ZNF239Q16600 458 aaKnown RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF5Q5TYX0 476 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PRAMEF6Q5VXH4 476 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 FAM109BQ6ICB4 259 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 DBX2Q6ZNG2 339 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-209ENST00000442510 ANGPTL5Q86XS5 388 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 PLPP5Q8NEB5 264 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 OR4E2Q8NGC2 313 aa5.38□□□□□ -1.55
PTPRC-209ENST00000442510 OR52N2Q8NGI0 321 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms