RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 DNAL1Q4LDG9 190 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 MSS51Q4VC12 460 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FASTKD1Q53R41 847 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 KRTCAP3Q53RY4 240 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 TSTD2Q5T7W7 516 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 C1orf189Q5VU69 101 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 MZT2BQ6NZ67 158 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CORO6Q6QEF8 472 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 ADGRD1Q6QNK2 874 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 TTLL10Q6ZVT0 673 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 COX15Q7KZN9 410 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 GDF7Q7Z4P5 450 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 LGI4Q8N135 537 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FBXO15Q8NCQ5 510 aaPredicted RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 OR4L1Q8NH43 312 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 TBC1D15Q8TC07 691 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 NR4A3Q92570 626 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FBXL8Q96CD0 374 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CCDC124Q96CT7 223 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SIGLEC10Q96LC7 697 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PAFAH2Q99487 392 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CCDC106Q9BWC9 280 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 XKR8Q9H6D3 395 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SLC22A11Q9NSA0 550 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SPHK1Q9NYA1 384 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CORINQ9Y5Q5 1042 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 HYKKA2RU49 373 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PRMT5O14744 637 aaPredicted RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 LRRTM2O43300 516 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CCNT2O60583 730 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 GUCY1B2O75343 617 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 TGDSO95455 350 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SNRPAP09012 282 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 RNF224P0DH78 156 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 ERGP11308 486 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CD247P20963 164 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 BGNP21810 368 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FBLP22087 321 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PSMA4P25789 261 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 GABRB3P28472 473 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PEBP1P30086 187 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SSTR2P30874 369 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 TDGF1P3P51864 188 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SMSP52788 366 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FAM53BQ14153 422 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 NDUFA9Q16795 377 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PCID2Q5JVF3 399 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 METTL11BQ5VVY1 283 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CES4AQ5XG92 561 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SP5Q6BEB4 398 aaPredicted RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 USP43Q70EL4 1123 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PIANPQ8IYJ0 282 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CPSF7Q8N684 471 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PPM1NQ8N819 430 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PCYOX1LQ8NBM8 494 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 OR52K1Q8NGK4 314 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 THOC3Q96J01 351 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CRB3Q9BUF7 120 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FAM96AQ9H5X1 160 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 DHCR7Q9UBM7 475 aaKnown RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 FAM8A1Q9UBU6 413 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 C19orf25Q9UFG5 118 aaPredicted RBP5.7□□□□□ -1.5
PTPRR-204ENST00000440835 PFDN2Q9UHV9 154 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 LAMP5Q9UJQ1 280 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 RAB26Q9ULW5 256 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 SOX13Q9UN79 622 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 OSGIN2Q9Y236 505 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 NTNG1Q9Y2I2 539 aa5.7□□□□□ -1.5
PTPRR-204ENST00000440835 CROCCQ5TZA2 2017 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 NBASA2RRP1 2371 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 DOCK10Q96BY6 2186 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 NSG1A0A0A6YYJ2 146 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TCRBV9S1A1TA0A576 114 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 OR2A25A4D2G3 310 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 SYNDIG1LA6NDD5 238 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 F5H423 210 aaPredicted RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 RTCAO00442 366 aaKnown RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 PLOD2O00469 737 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 BANF1O75531 89 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 JRKO75564 520 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 ERVK-10P10266 1014 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 UBL4AP11441 157 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 ALAS2P22557 587 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 PRDX6P30041 224 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TNFSF10P50591 281 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TMPRSS15P98073 1019 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 IFITM2Q01629 132 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TRAP1Q12931 704 aaKnown RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 SF1Q15637 639 aaKnown RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 ZNF630Q2M218 657 aaPredicted RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TCHHL1Q5QJ38 904 aaPredicted RBP5.69□□□□□ -1.5
PTPRR-204ENST00000440835 PGM2L1Q6PCE3 622 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 ZBTB46Q86UZ6 589 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 GPR180Q86V85 440 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 CLDN19Q8N6F1 224 aa5.69□□□□□ -1.5
PTPRR-204ENST00000440835 TSPAN14Q8NG11 270 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms