RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 COL6A3P12111 3177 aa7.54□□□□□ -1.2
APP-209ENST00000440126 FAM227AF5H4B4 570 aa7.54□□□□□ -1.2
APP-209ENST00000440126 OR1F1O43749 312 aa7.54□□□□□ -1.2
APP-209ENST00000440126 LCMT2O60294 686 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 EML2O95834 649 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBX6O95947 436 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 TP53P04637 393 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 KDELR2P33947 212 aa7.54□□□□□ -1.2
APP-209ENST00000440126 NUDT1P36639 197 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SNRPNP63162 240 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 ADARB1P78563 741 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 FCHO2Q0JRZ9 810 aa7.54□□□□□ -1.2
APP-209ENST00000440126 BNIP3Q12983 259 aa7.54□□□□□ -1.2
APP-209ENST00000440126 MTAPQ13126 283 aa7.54□□□□□ -1.2
APP-209ENST00000440126 MLF2Q15773 248 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 ZNF750Q32MQ0 723 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ABRAXAS1Q6UWZ7 409 aa7.54□□□□□ -1.2
APP-209ENST00000440126 LYPD8Q6UX82 237 aa7.54□□□□□ -1.2
APP-209ENST00000440126 KCTD8Q6ZWB6 473 aa7.54□□□□□ -1.2
APP-209ENST00000440126 LRRTM4Q86VH4 590 aa7.54□□□□□ -1.2
APP-209ENST00000440126 LINC01555Q8NAE3 123 aa7.54□□□□□ -1.2
APP-209ENST00000440126 BPIFB6Q8NFQ5 453 aa7.54□□□□□ -1.2
APP-209ENST00000440126 NFKBIDQ8NI38 313 aa7.54□□□□□ -1.2
APP-209ENST00000440126 HM13Q8TCT9 377 aa7.54□□□□□ -1.2
APP-209ENST00000440126 C16orf78Q8WTQ4 265 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D20Q96BZ9 403 aa7.54□□□□□ -1.2
APP-209ENST00000440126 CCDC115Q96NT0 180 aa7.54□□□□□ -1.2
APP-209ENST00000440126 INSM2Q96T92 566 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
APP-209ENST00000440126 DGCR6LQ9BY27 220 aa7.54□□□□□ -1.2
APP-209ENST00000440126 WDR26Q9H7D7 661 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SYNPO2LQ9H987 977 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SLAMF7Q9NQ25 335 aa7.54□□□□□ -1.2
APP-209ENST00000440126 RASSF1Q9NS23 344 aa7.54□□□□□ -1.2
APP-209ENST00000440126 RAD18Q9NS91 495 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TMEM184CQ9NVA4 438 aa7.54□□□□□ -1.2
APP-209ENST00000440126 RPH3AQ9Y2J0 694 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 AP3M1Q9Y2T2 418 aa7.54□□□□□ -1.2
APP-209ENST00000440126 POM121BA6NF01 834 aa7.53□□□□□ -1.2
APP-209ENST00000440126 QSOX1O00391 747 aa7.53□□□□□ -1.2
APP-209ENST00000440126 JRKO75564 520 aa7.53□□□□□ -1.2
APP-209ENST00000440126 APODP05090 189 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SLC35G4P0C7Q5 338 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SLC9A3P48764 834 aa7.53□□□□□ -1.2
APP-209ENST00000440126 GALK2Q01415 458 aa7.53□□□□□ -1.2
APP-209ENST00000440126 KRT33BQ14525 404 aa7.53□□□□□ -1.2
APP-209ENST00000440126 CLCA4Q14CN2 919 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SLC5A12Q1EHB4 618 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ZBED5Q49AG3 693 aa7.53□□□□□ -1.2
APP-209ENST00000440126 BCL7AQ4VC05 210 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TPRG1LQ5T0D9 272 aa7.53□□□□□ -1.2
APP-209ENST00000440126 LAIR1Q6GTX8 287 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SDE2Q6IQ49 451 aa7.53□□□□□ -1.2
APP-209ENST00000440126 R3HCC1LQ7Z5L2 792 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 AKAP14Q86UN6 197 aa7.53□□□□□ -1.2
APP-209ENST00000440126 PDZD3Q86UT5 571 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ADGRF3Q8IZF5 1079 aa7.53□□□□□ -1.2
APP-209ENST00000440126 NLGN4XQ8N0W4 816 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ASCC1Q8N9N2 400 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 PPCDCQ96CD2 204 aa7.53□□□□□ -1.2
APP-209ENST00000440126 C11orf24Q96F05 449 aaPredicted RBP7.53□□□□□ -1.2
APP-209ENST00000440126 YIPF4Q9BSR8 244 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SGPP1Q9BX95 441 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SLC6A16Q9GZN6 736 aa7.53□□□□□ -1.2
APP-209ENST00000440126 AMBNQ9NP70 447 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ATP13A2Q9NQ11 1180 aa7.53□□□□□ -1.2
APP-209ENST00000440126 FAM118AQ9NWS6 357 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TEX10Q9NXF1 929 aaPredicted RBP7.53□□□□□ -1.2
APP-209ENST00000440126 PDP1Q9P0J1 537 aaPredicted RBP7.53□□□□□ -1.2
APP-209ENST00000440126 SAMHD1Q9Y3Z3 626 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 A0A1W2PPW3 197 aa7.53□□□□□ -1.2
APP-209ENST00000440126 H0YC42 278 aa7.53□□□□□ -1.2
APP-209ENST00000440126 K7EQS6 105 aa7.53□□□□□ -1.2
APP-209ENST00000440126 PLPP1O14494 284 aa7.53□□□□□ -1.2
APP-209ENST00000440126 GCM2O75603 506 aaPredicted RBP7.53□□□□□ -1.2
APP-209ENST00000440126 INMTO95050 263 aa7.53□□□□□ -1.2
APP-209ENST00000440126 OR5F1O95221 314 aa7.53□□□□□ -1.2
APP-209ENST00000440126 CHI3L1P36222 383 aaPredicted RBP7.53□□□□□ -1.2
APP-209ENST00000440126 HPCAL1P37235 193 aa7.53□□□□□ -1.2
APP-209ENST00000440126 IL5RAQ01344 420 aa7.53□□□□□ -1.2
APP-209ENST00000440126 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 CD47Q08722 323 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ZNF763Q0D2J5 394 aa7.53□□□□□ -1.2
APP-209ENST00000440126 RAPSNQ13702 412 aa7.53□□□□□ -1.2
APP-209ENST00000440126 KCNC3Q14003 757 aa7.53□□□□□ -1.2
APP-209ENST00000440126 GANABQ14697 944 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 EIF4HQ15056 248 aaKnown RBP7.53□□□□□ -1.2
APP-209ENST00000440126 RGNQ15493 299 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TMEM52BQ4KMG9 183 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ZNF542PQ5EBM4 170 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
APP-209ENST00000440126 CCNYL2Q5T2Q4 361 aa7.53□□□□□ -1.2
APP-209ENST00000440126 ANKRD54Q6NXT1 300 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TMPRSS9Q7Z410 1059 aa7.53□□□□□ -1.2
APP-209ENST00000440126 DSG4Q86SJ6 1040 aa7.53□□□□□ -1.2
APP-209ENST00000440126 EID3Q8N140 333 aa7.53□□□□□ -1.2
APP-209ENST00000440126 OR10Z1Q8NGY1 313 aa7.53□□□□□ -1.2
APP-209ENST00000440126 RAD51AP1Q96B01 352 aa7.53□□□□□ -1.2
APP-209ENST00000440126 TM9SF2Q99805 663 aa7.53□□□□□ -1.2
APP-209ENST00000440126 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms