RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
SMPD4-209ENST00000439886 EIF3KQ9UBQ5 218 aaKnown RBP11.2□□□□□ -0.62
SMPD4-209ENST00000439886 DNAJC25-GNG10A0A024R161 153 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 LOC105369274A0A096LPK9 316 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 BET1O15155 118 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 GMDSO60547 372 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SRCP12931 536 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PTNP21246 168 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RPS5P46782 204 aaKnown RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 MAPKAPK2P49137 400 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CRYBB1P53674 252 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CACNG1Q06432 222 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 DUSP28Q4G0W2 176 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 USP45Q70EL2 814 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PTOV1Q86YD1 416 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 OR4N4Q8N0Y3 316 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 C1orf52Q8N6N3 182 aaKnown RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 BCL2L14Q9BZR8 327 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SPRTNQ9H040 489 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 HHATLQ9HCP6 504 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SEC14L4Q9UDX3 406 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 V9GYH0 126 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 LYRM1O43325 122 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CLDN7O95471 211 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PRPS1L1P21108 318 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 MAGEA2P43356 314 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 C2orf80Q0P641 193 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SCARB2Q14108 478 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 KLHL12Q53G59 568 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 COX20Q5RI15 118 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 IER5LQ5T953 404 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PLCZ1Q86YW0 608 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 DENND6BQ8NEG7 585 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 FAM193BQ96PV7 902 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 NELL2Q99435 816 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CSNK1G1Q9HCP0 422 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PCDHB16Q9NRJ7 776 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 STUB1Q9UNE7 303 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 MN1Q10571 1320 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 A0A0B4J293 547 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 TRBC2A0A5B9 178 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RFXAPO00287 272 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 KLK8O60259 260 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CSO75390 466 aaKnown RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 GASTP01350 101 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 EPOP01588 193 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CHMP24386 653 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CD52P31358 61 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CRISP1P54107 249 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CTBP2P56545 445 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 DCDC1P59894 354 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RPS26P62854 115 aaKnown RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 S100A12P80511 92 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SLC35F1Q5T1Q4 408 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
SMPD4-209ENST00000439886 FAHD1Q6P587 224 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 AGMOQ6ZNB7 445 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 LHFPL3Q86UP9 236 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 COMMD7Q86VX2 200 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RBFAQ8N0V3 343 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 LMNTD1Q8N9Z9 388 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 PIGKQ92643 395 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 RNF31Q96EP0 1072 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 C1QTNF6Q9BXI9 259 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 GABARAPL1Q9H0R8 117 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
SMPD4-209ENST00000439886 SIP14410 1827 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 F8W036 122 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 NFKBIEO00221 500 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 SYPP08247 313 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 ADRA2AP08913 450 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 SELLP14151 372 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 F8A1P23610 371 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 HTR7P34969 479 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 YBEYP58557 167 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-209ENST00000439886 KCNJ10P78508 379 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 ACVR1Q04771 509 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 MICAQ29983 383 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 FRG2Q64ET8 278 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 MTFR2Q6P444 385 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-209ENST00000439886 XKRXQ6PP77 449 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 KIAA1324Q6UXG2 1013 aaKnown RBP11.18□□□□□ -0.62
SMPD4-209ENST00000439886 SERPINA11Q86U17 422 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 FAM124AQ86V42 546 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 CDH26Q8IXH8 852 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 FRG2BQ96QU4 278 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 C1QTNF3Q9BXJ4 246 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 PPA2Q9H2U2 334 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
SMPD4-209ENST00000439886 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms