RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 EXOC3L2Q2M3D2 409 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PYDC2Q56P42 97 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PLET1Q6UQ28 207 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MON1AQ86VX9 555 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 APIPQ96GX9 242 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CINPQ9BW66 212 aaPredicted RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 GTPBP2Q9BX10 602 aaKnown RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 CCL26Q9Y258 94 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 HSPB11Q9Y547 144 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PCDHB1Q9Y5F3 818 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TBX18O95935 607 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TSPAN19P0C672 248 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CKMT1AP12532 417 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TNFRSF1BP20333 461 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MAPKAPK2P49137 400 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 WNT3P56703 355 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MXD1Q05195 221 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.1
HPS4-206ENST00000439453 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CCNJQ5T5M9 372 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 FAAH2Q6GMR7 532 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TANGO2Q6ICL3 276 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 VITQ6UXI7 678 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MBOAT1Q6ZNC8 495 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PTCHD4Q6ZW05 846 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TRIM69Q86WT6 500 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CLECL1Q8IZS7 167 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 OR9Q2Q8NGE9 314 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 LKAAEAR1Q8TD35 194 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CHFRQ96EP1 664 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CMTM7Q96FZ5 175 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 APOLD1Q96LR9 279 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 HDHD5Q9BXW7 423 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 B3GNT2Q9NY97 397 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 GDE1Q9NZC3 331 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 STUB1Q9UNE7 303 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 LSM2Q9Y333 95 aaKnown RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 MRPS23Q9Y3D9 190 aaKnown RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 A0A1W2PQL4 384 aaPredicted RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 CDRT1O95170 752 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PTX3P26022 381 aaPredicted RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 HOXD9P28356 352 aaPredicted RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 PTGES3Q15185 160 aaKnown RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 LCN1P1Q5VSP4 162 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MIB1Q86YT6 1006 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 SLC44A2Q8IWA5 706 aaPredicted RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 OR7D4Q8NG98 312 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PSKH2Q96QS6 385 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 EPHX3Q9H6B9 360 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TPT1P8Q9HAU6 139 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 ING3Q9NXR8 418 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 FZD4Q9ULV1 537 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 SCML2Q9UQR0 700 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 FRYLO94915 3013 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ZNF840PA6NDX5 716 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SMLR1H3BR10 107 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 WWP2O00308 870 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SCN2BO60939 215 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 STK16O75716 305 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 POU2F1P14859 743 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 DGKAP23743 735 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ITGB7P26010 798 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CACNG1Q06432 222 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 UGT8Q16880 541 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 HKDC1Q2TB90 917 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 GLCCI1Q86VQ1 547 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 MAL2Q969L2 176 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 EBPLQ9BY08 206 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SMG9Q9H0W8 520 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 ELOVL6Q9H5J4 265 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SLC23A1Q9UHI7 598 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CLEC2DQ9UHP7 191 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SSR3Q9UNL2 185 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 RAI2Q9Y5P3 530 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ZFP37Q9Y6Q3 630 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 MUC22E2RYF6 1773 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 ZNF318Q5VUA4 2279 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CUL9Q8IWT3 2517 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 HYKKA2RU49 373 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 OR5K3A6NET4 321 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ANKRD66B4E2M5 251 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 H7C0S8 307 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 MPZL2O60487 215 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CSO75390 466 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 ACADMP11310 421 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 PIPP12273 146 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 PRPS1L1P21108 318 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SSTR4P31391 388 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CSTF2P33240 577 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-206ENST00000439453 MAP2K3P46734 347 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 MAPK12P53778 367 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 MADCAM1Q13477 382 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ARHGEF7Q14155 803 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SPHARQ15513 63 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 FAM205BPQ63HN1 556 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms