RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MS4A12Q9NXJ0 267 aa17.15■□□□□ 0.34
AC004540.1-201ENST00000439120 PPT2Q9UMR5 302 aa17.15■□□□□ 0.34
AC004540.1-201ENST00000439120 A0A1B0GTH9 108 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 ESYT3A0FGR9 886 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 E9PLN8 166 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 ACOT7O00154 380 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 IRF9Q00978 393 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 E2F2Q14209 437 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 PFKFB4Q16877 469 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 OR4C11Q6IEV9 310 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 PAOXQ6QHF9 649 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 ZNF572Q7Z3I7 529 aaPredicted RBP17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 GDF7Q7Z4P5 450 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 ZFP62Q8NB50 900 aaPredicted RBP17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 OR5L2Q8NGL0 311 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 C16orf52Q8NHV5 167 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 SLC2A12Q8TD20 617 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 PHF10Q8WUB8 498 aaKnown RBP17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 RGMAQ96B86 450 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 REPS1Q96D71 796 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 DGAT2Q96PD7 388 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 RASL10BQ96S79 203 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 VKORC1Q9BQB6 163 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 OR51B5Q9H339 312 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 SNX15Q9NRS6 342 aa17.14■□□□□ 0.33
AC004540.1-201ENST00000439120 MYO9AB2RTY4 2548 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 OR6B1O95007 311 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 SCELO95171 688 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 C2P06681 752 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 TYK2P29597 1187 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 TLX1P31314 330 aaPredicted RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 ARL1P40616 181 aaPredicted RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 SOX3P41225 446 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 PIK3CBP42338 1070 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 SERPINB8P50452 374 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 HK2P52789 917 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 RNF4P78317 190 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 SLAMF1Q13291 335 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 ACAP2Q15057 778 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 DEPDC1Q5TB30 811 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 LIPJQ5W064 366 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 CEP128Q6ZU80 1094 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 NCCRP1Q6ZVX7 275 aaPredicted RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 CD163Q86VB7 1156 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 CENPLQ8N0S6 344 aaPredicted RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 OR8K3Q8NH51 312 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 HUS1BQ8NHY5 278 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 FAM57AQ8TBR7 257 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 MTERF1Q99551 399 aaKnown RBP17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 COQ3Q9NZJ6 369 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 PHF11Q9UIL8 331 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 PCDHGA11Q9Y5H2 935 aa17.13■□□□□ 0.33
AC004540.1-201ENST00000439120 NCOA6Q14686 2063 aaPredicted RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 GTF3C1Q12789 2109 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 A0A096LPK6 155 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 TMEM200CA6NKL6 621 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 PDE9AO76083 593 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 ALDH18A1P54886 795 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 PLIN5Q00G26 463 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 GUCY2DQ02846 1103 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 PCDH1Q08174 1060 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 CMPK2Q5EBM0 449 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 ARHGAP11AQ6P4F7 1023 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 RTL4Q6ZR62 310 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 GK5Q6ZS86 529 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 CHERPQ8IWX8 916 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 ZNF321PQ8N8H1 164 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 OR2M7Q8NG81 312 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 CA5BP1Q8WTZ4 195 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 RBM18Q96H35 190 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 RPF2Q9H7B2 306 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 DMRT3Q9NQL9 472 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 CPSF2Q9P2I0 782 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 MTRF1LQ9UGC7 380 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 TNPO3Q9Y5L0 923 aaKnown RBP17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 CREBBPQ92793 2442 aa17.12■□□□□ 0.33
AC004540.1-201ENST00000439120 FGF17O60258 216 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 KLHL2O95198 593 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 MTHFD2P13995 350 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 PTX3P26022 381 aaPredicted RBP17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 BUD31P41223 144 aaPredicted RBP17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 STT3AP46977 705 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 PPIAP62937 165 aaKnown RBP17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 BIKQ13323 160 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 OPN5Q6U736 354 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 RGS9BPQ6ZS82 235 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 FGD2Q7Z6J4 655 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 GPR180Q86V85 440 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 RNF175Q8N4F7 328 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 TANKQ92844 425 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 ANKRD9Q96BM1 317 aaPredicted RBP17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 SDCCAG3Q96C92 435 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 ART5Q96L15 291 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms