RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 DOC2AQ14183 400 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SZRD1Q7Z422 152 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 LAS2Q8IYD9 372 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 RBFAQ8N0V3 343 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 KLHL6Q8WZ60 621 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 RAB8BQ92930 207 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 C17orf62Q9BQA9 187 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ZFYVE1Q9HBF4 777 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 AP3M1Q9Y2T2 418 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 PRKYO43930 277 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 CD160O95971 181 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 POLR2CP19387 275 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-204ENST00000438964 CXCL3P19876 107 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 CPN2P22792 545 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-204ENST00000438964 THPOP40225 353 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 MAB21L1Q13394 359 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 ARHGEF6Q15052 776 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 PLCZ1Q86YW0 608 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 C1QTNF7Q9BXJ2 289 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 MS4A7Q9GZW8 240 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-204ENST00000438964 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.36
ACTN1-204ENST00000438964 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 E9PQ18 207 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 PDE9AO76083 593 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 CD8BP10966 210 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 RPL9P32969 192 aaKnown RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 ABATP80404 500 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 FABP5Q01469 135 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 ABRQ12979 859 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 MLIPQ5VWP3 458 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 IDO2Q6ZQW0 420 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 LILRA3Q8N6C8 439 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 FAM46DQ8NEK8 389 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 OTULINQ96BN8 352 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 SENP5Q96HI0 755 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 PRR14Q9BWN1 585 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 SORBS1Q9BX66 1292 aaKnown RBP12.77□□□□□ -0.37
ACTN1-204ENST00000438964 VPS29Q9UBQ0 182 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 IL20RAQ9UHF4 553 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
ACTN1-204ENST00000438964 A0A0A6YYJ9 748 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ZAR1LA6NP61 321 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 SLC22A5O76082 557 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 CH25HO95992 272 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ITGALP20701 1170 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ZBTB37Q5TC79 503 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 TMEM65Q6PI78 240 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 CASP12Q6UXS9 341 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF680Q8NEM1 530 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ANKRA2Q9H9E1 313 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 C5AR2Q9P296 337 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 TDRD15B5MCY1 1934 aaKnown RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 GLYATL1P3A0A0U1RQE8 302 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 CXCL11O14625 94 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 SH3BP5O60239 455 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 SEMA7AO75326 666 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 GSTM1P09488 218 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 HIST1H2AGP0C0S8 130 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ATF6P18850 670 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 TYMPP19971 482 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 HIST1H2ADP20671 130 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 HMGCLP35914 325 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 MAPKAPK2P49137 400 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 MAP4K2Q12851 820 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 MTAPQ13126 283 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 TUSC3Q13454 348 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 TNK1Q13470 666 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 GDF6Q6KF10 455 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 C9orf43Q8TAL5 461 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 HIST1H2AHQ96KK5 128 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 PIP5K1AQ99755 562 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 HIST1H2AJQ99878 128 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 H2AFJQ9BTM1 129 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 RBFOX1Q9NWB1 397 aaKnown RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 NDUFB11Q9NX14 153 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
ACTN1-204ENST00000438964 EXO1Q9UQ84 846 aaKnown RBP12.76□□□□□ -0.37
ACTN1-204ENST00000438964 PCDHB1Q9Y5F3 818 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms