RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF840PA6NDX5 716 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SDR42E2A6NKP2 422 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 NPIPA3F8WFD2 350 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SLC33A1O00400 549 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 TEX28O15482 410 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SLC7A4O43246 635 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SELENOFO60613 162 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRAF2O60831 178 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 BAG3O95817 575 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 MOCS2O96007 188 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ATP1B1P05026 303 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SERPING1P05155 500 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 YES1P07947 543 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 STAG3L1P0CL83 205 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRKAR1AP10644 381 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 CD59P13987 128 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 DARSP14868 501 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SFTPDP35247 375 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 OR3A3P47888 321 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 DNA2P51530 1060 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SRSF9Q13242 221 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 TRIM29Q14134 588 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 MS4A18Q3C1V0 323 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 GPR33Q49SQ1 333 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ANKRD20A4Q4UJ75 823 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 LBHQ53QV2 105 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ANKRD20A8PQ5CZ79 823 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ANKRD20A2Q5SQ80 823 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ANKRD20A1Q5TYW2 823 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ANKRD20A3Q5VUR7 823 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 RSBN1Q5VWQ0 802 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 CASC4Q6P4E1 433 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SHQ1Q6PI26 577 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRSS55Q6UWB4 352 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 BTNL8Q6UX41 500 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 LEKR1Q6ZMV7 388 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 FCRLAQ7L513 359 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 OTOAQ7RTW8 1153 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 TIPARPQ7Z3E1 657 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 CD177Q8N6Q3 437 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC63Q8NA47 563 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SLC37A3Q8NCC5 494 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 OR7A2PQ8NGA2 310 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 PIK3R3Q92569 461 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 CNRIP1Q96F85 164 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 VMP1Q96GC9 406 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SERAC1Q96JX3 654 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ATG101Q9BSB4 218 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 DNAI2Q9GZS0 605 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 HOXD1Q9GZZ0 328 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 TMEM206Q9H813 350 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 MINDY3Q9H8M7 445 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 RNF121Q9H920 327 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 IARS2Q9NSE4 1012 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 EXOC1Q9NV70 894 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ELF5Q9UKW6 265 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 PA2G4Q9UQ80 394 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 R4GN57 208 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 YTHDC2Q9H6S0 1430 aaKnown RBP2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 C5P01031 1676 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 ADGRB1O14514 1584 aa2.4□□□□□ -2.03
HMGB1P31-201ENST00000437242 SBF1O95248 1867 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CICQ96RK0 1608 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 LRPPRCP42704 1394 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 LTN1O94822 1766 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 TULP4Q9NRJ4 1543 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 TRAV18A0A075B6X5 111 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 ILVBLA1L0T0 632 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 ZNF354AO60765 605 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 EEF2P13639 858 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 FRKP42685 505 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRELPP51888 382 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 SNU13P55769 128 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CLDN17P56750 224 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 ASIC1P78348 528 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 IRX4P78413 519 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 NDPQ00604 133 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 YWHAHQ04917 246 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CDH18Q13634 790 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 FUT11Q495W5 492 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRR30Q53SZ7 412 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 C1QTNF12Q5T7M4 302 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 TTC27Q6P3X3 843 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CYB5D1Q6P9G0 228 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CPEB2Q7Z5Q1 589 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 HOOK3Q86VS8 718 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 MEX3DQ86XN8 651 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CREBRFQ8IUR6 639 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 GPC2Q8N158 579 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 FIBINQ8TAL6 211 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CKAP2Q8WWK9 683 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 TEKT1Q969V4 418 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 SNRNP40Q96DI7 357 aaKnown RBP2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 KLHL5Q96PQ7 755 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 NDNQ99608 321 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 ATF6BQ99941 703 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC3Q9BQI4 270 aa2.39□□□□□ -2.03
HMGB1P31-201ENST00000437242 OVOL2Q9BRP0 275 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms