RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PGM2L1Q6PCE3 622 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 AGTRAPQ6RW13 159 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ADCK1Q86TW2 530 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ISCA2Q86U28 154 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 TRABD2AQ86V40 505 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ZNF321PQ8N8H1 164 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 SCAIQ8N9R8 606 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 OR4D9Q8NGE8 314 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 RHEBL1Q8TAI7 183 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ABHD4Q8TB40 342 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 RSC1A1Q92681 617 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 PTP4A1Q93096 173 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 GFM2Q969S9 779 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 FBXL8Q96CD0 374 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ATP6V0BQ99437 205 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 TM9SF2Q99805 663 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 CIB1Q99828 191 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 SH3GL2Q99962 352 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 MRPL57Q9BQC6 102 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 STRADBQ9C0K7 418 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 RAB33BQ9H082 229 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 PCBD2Q9H0N5 130 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ATG10Q9H0Y0 220 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 CNOT10Q9H9A5 744 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 KCNK13Q9HB14 408 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 TMBIM4Q9HC24 238 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 KCNK9Q9NPC2 374 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 PAQR5Q9NXK6 330 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 DLL3Q9NYJ7 618 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 COQ3Q9NZJ6 369 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 STOX2Q9P2F5 926 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 CRNNQ9UBG3 495 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 XPR1Q9UBH6 696 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 RPS6KA6Q9UK32 745 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 AURKCQ9UQB9 309 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 ERVK-19Q9WJR5 959 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 DMRT1Q9Y5R6 373 aa5.9□□□□□ -1.46
ECHDC1-208ENST00000436638 VCANP13611 3396 aa5.9□□□□□ -1.47
ECHDC1-208ENST00000436638 ZFC3H1O60293 1989 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 A0A0J9YY10 115 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 PMS2P1A4D2B8 440 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 TLCD2A6NGC4 264 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ZNF879B4DU55 563 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 B9A039 149 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 D6RAR5 112 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 NTN3O00634 580 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CCNT2O60583 730 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 H2AFYO75367 372 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CSO75390 466 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SPAG7O75391 227 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ATP5HO75947 161 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 IPO13O94829 963 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 WDR47O94967 919 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SLC16A8O95907 504 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CLPTM1O96005 669 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 GLAP06280 429 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 QDPRP09417 244 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 MYL2P10916 166 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 POU2F1P14859 743 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 UGT2B7P16662 529 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 NAGAP17050 411 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 IL11P20809 199 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 GALP22466 123 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 IMPA1P29218 277 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 PRDX3P30048 256 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 HNRNPH1P31943 449 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 TRHRP34981 398 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CRHR1P34998 444 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ARL1P40616 181 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 PCP4P48539 62 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 GFERP55789 205 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 TSPAN5P62079 268 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ABATP80404 500 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SLC18A2Q05940 514 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 TRA2AQ13595 282 aaKnown RBP eCLIP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 E2F2Q14209 437 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ERV3-1Q14264 604 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 FASTKQ14296 549 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 GRB7Q14451 532 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 OR4D1Q15615 310 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SLC5A12Q1EHB4 618 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 N4BP2L1Q5TBK1 243 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 HES3Q5TGS1 186 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 AGBL2Q5U5Z8 902 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 METTL2BQ6P1Q9 378 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CYB5D1Q6P9G0 228 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 WDR74Q6RFH5 385 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SUSD1Q6UWL2 747 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 LCTLQ6UWM7 567 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SBSNQ6UWP8 590 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 FAM92BQ6ZTR7 304 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ADCK2Q7Z695 626 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 SLCO6A1Q86UG4 719 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 C17orf64Q86WR6 236 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 TMPRSS12Q86WS5 348 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 RASGRP3Q8IV61 690 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 MCEMP1Q8IX19 187 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 LRRC34Q8IZ02 419 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 ADGRF3Q8IZF5 1079 aa5.89□□□□□ -1.47
ECHDC1-208ENST00000436638 CENPLQ8N0S6 344 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms