RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MPEG1Q2M385 716 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 HES3Q5TGS1 186 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 OR52E8Q6IFG1 317 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 C16orf89Q6UX73 402 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 ASRGL1Q7L266 308 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 DNAJB8Q8NHS0 232 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 EXOSC8Q96B26 276 aaKnown RBP21.71■■□□□ 1.07
CPSF4-204ENST00000436336 KLHL29Q96CT2 875 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 SERHLQ9NQF3 203 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 C5AR2Q9P296 337 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 BTNL2Q9UIR0 455 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 PSME2Q9UL46 239 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 LOXL2Q9Y4K0 774 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 TMEM184BQ9Y519 407 aaPredicted RBP21.71■■□□□ 1.07
CPSF4-204ENST00000436336 SPEGQ15772 3267 aa21.71■■□□□ 1.07
CPSF4-204ENST00000436336 SPAARA0A1B0GVQ0 90 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 GLOD5A6NK44 160 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 KCNH1O95259 989 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 TRMT5Q32P41 509 aaKnown RBP21.7■■□□□ 1.06
CPSF4-204ENST00000436336 DNAL1Q4LDG9 190 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 ANKRD46Q86W74 232 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 DNAJB14Q8TBM8 379 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF304Q9HCX3 659 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 SLC35C2Q9NQQ7 365 aa21.7■■□□□ 1.06
CPSF4-204ENST00000436336 NUP214P35658 2090 aaPredicted RBP21.7■■□□□ 1.06
CPSF4-204ENST00000436336 RIF1Q5UIP0 2472 aaKnown RBP21.7■■□□□ 1.06
CPSF4-204ENST00000436336 BLACEA4D250 179 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 PDPK1O15530 556 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CEACAM1P13688 526 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 HNRNPFP52597 415 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CLDN6P56747 220 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 MAT1AQ00266 395 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 C6orf10Q5SRN2 563 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 RAB11FIP2Q7L804 512 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 DHDDSQ86SQ9 333 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 PGAM4Q8N0Y7 254 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 OR51Q1Q8NH59 317 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CIDECQ96AQ7 238 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CCDC115Q96NT0 180 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CTRCQ99895 268 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 SLC39A1Q9NY26 324 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CROTQ9UKG9 612 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 MAU2Q9Y6X3 613 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 FAM186AA6NE01 2351 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 GFRA3O60609 400 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 ERN1O75460 977 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 FRKP42685 505 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 OR1D4P47884 311 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 TRPC1P48995 793 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 PCBP4P57723 403 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 SIM1P81133 766 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 PLIN5Q00G26 463 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 EIF3IQ13347 325 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 DSG2Q14126 1118 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 TANKQ92844 425 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 MIEF2Q96C03 454 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 LRRC58Q96CX6 371 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 CLIP3Q96DZ5 547 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 PEX11GQ96HA9 241 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 HOPXQ9BPY8 73 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 SLAMF8Q9P0V8 285 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 MRPS33Q9Y291 106 aaKnown RBP21.69■■□□□ 1.06
CPSF4-204ENST00000436336 MAP4K5Q9Y4K4 846 aa21.69■■□□□ 1.06
CPSF4-204ENST00000436336 A0A096LPI6 279 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 A0A1W2PRB8 838 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 WASHC1A8K0Z3 465 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 RFXANKO14593 260 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 ERAL1O75616 437 aaKnown RBP21.68■■□□□ 1.06
CPSF4-204ENST00000436336 FBLP22087 321 aaKnown RBP21.68■■□□□ 1.06
CPSF4-204ENST00000436336 RAB15P59190 212 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 SYT16Q17RD7 645 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 LRIF1Q5T3J3 769 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 C1orf189Q5VU69 101 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 C8orf82Q6P1X6 216 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-204ENST00000436336 CEACAM20Q6UY09 585 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 DLEU7Q6UYE1 221 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 CLECL1Q8IZS7 167 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 SHISA5Q8N114 240 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 COL26A1Q96A83 441 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 PANX1Q96RD7 426 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 IL1RL2Q9HB29 575 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 GIMAP4Q9NUV9 329 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 ENTPD4Q9Y227 616 aa21.68■■□□□ 1.06
CPSF4-204ENST00000436336 SEC16AO15027 2179 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 CCDC187A0A096LP49 1063 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 FAM227AF5H4B4 570 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 FXYD1O00168 92 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 SLC30A4O14863 429 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 CEBPEQ15744 281 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 FAM180BQ6P0A1 224 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 SAMD14Q8IZD0 417 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-204ENST00000436336 DEFB107AQ8IZN7 70 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 CACTIN-AS1Q8N1I8 211 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 SLC38A9Q8NBW4 561 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 TMEM52Q8NDY8 209 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-204ENST00000436336 ZBED6CLQ96FA7 236 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-204ENST00000436336 GBP5Q96PP8 586 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 INPP5KQ9BT40 448 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 PAIP1Q9H074 479 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms