RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 BRF2Q9HAW0 419 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 LGALS13Q9UHV8 139 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 MID2Q9UJV3 735 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 ZNF225Q9UK10 706 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 ADAM29Q9UKF5 820 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 VPS4AQ9UN37 437 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 PPIEQ9UNP9 301 aaKnown RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 CLDN16Q9Y5I7 305 aa15.2■□□□□ 0.02
SMPD4-207ENST00000435455 COPG1Q9Y678 874 aaKnown RBP15.2■□□□□ 0.02
SMPD4-207ENST00000435455 A0A0A6YYD5 115 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 A0A1B0GTL3 188 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 OR5H15A6NDH6 313 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 G3V2L1 256 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 EEDO75530 441 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 ENO1P06733 434 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 FAM58BPP0C7Q3 252 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 HSD3B1P14060 373 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 HSD3B2P26439 372 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 FCRLBQ6BAA4 426 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 MRM1Q6IN84 353 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 RPUSD3Q6P087 351 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 RPS19BP1Q86WX3 136 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 C4orf33Q8N1A6 199 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 BEST3Q8N1M1 668 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 CCDC63Q8NA47 563 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 CATSPER1Q8NEC5 780 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 DAZLQ92904 295 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 VMP1Q96GC9 406 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 IQCGQ9H095 443 aaKnown RBP15.19■□□□□ 0.02
SMPD4-207ENST00000435455 WDR41Q9HAD4 459 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 MKS1Q9NXB0 559 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 VTI1BQ9UEU0 232 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 SLC12A4Q9UP95 1085 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 ATG4BQ9Y4P1 393 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 CLCA3PQ9Y6N3 262 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 LRRK2Q5S007 2527 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 ESPL1Q14674 2120 aa15.19■□□□□ 0.02
SMPD4-207ENST00000435455 CCDC151A5D8V7 595 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 MANBAO00462 879 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 PROM1O43490 865 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 TMPRSS11DO60235 418 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 LDB3O75112 727 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 PDYNP01213 254 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 CPA3P15088 417 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 HMOX2P30519 316 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 CLCN2P51788 898 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 DNAJB13P59910 316 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 INAQ16352 499 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 TRABD2AQ86V40 505 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 METTL4Q8N3J2 472 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 KIF2BQ8N4N8 673 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 CDYL2Q8N8U2 506 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 APCDD1LQ8NCL9 501 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 OR14A16Q8NHC5 309 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 METTL6Q8TCB7 284 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 ANKRD9Q96BM1 317 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-207ENST00000435455 NPAS2Q99743 824 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 UTP23Q9BRU9 249 aaKnown RBP15.18■□□□□ 0.02
SMPD4-207ENST00000435455 TMEM109Q9BVC6 243 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 MRPL1Q9BYD6 325 aaKnown RBP15.18■□□□□ 0.02
SMPD4-207ENST00000435455 GSTO2Q9H4Y5 243 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 CDCP1Q9H5V8 836 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 AGPAT4Q9NRZ5 378 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 FARSBQ9NSD9 589 aaKnown RBP15.18■□□□□ 0.02
SMPD4-207ENST00000435455 ASF1BQ9NVP2 202 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 RAB21Q9UL25 225 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 ASB4Q9Y574 426 aa15.18■□□□□ 0.02
SMPD4-207ENST00000435455 SVILO95425 2214 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 TRBV11-1A0A0K0K1C0 115 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 ARHGAP10A1A4S6 786 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 GABRR3A8MPY1 467 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 H3BQF6 201 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 FGF17O60258 216 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 PRAMEF2O60811 474 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 ESRRBO95718 433 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 F10P00742 488 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 NR2F6P10588 404 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 COX7A2P14406 83 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 NAGLUP54802 743 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 IGLV3-21P80748 117 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-207ENST00000435455 CSTF3Q12996 717 aaKnown RBP15.17■□□□□ 0.02
SMPD4-207ENST00000435455 CFAP157Q5JU67 520 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 HORMAD2Q8N7B1 307 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 GBP7Q8N8V2 638 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-207ENST00000435455 MORN4Q8NDC4 146 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 NCLNQ969V3 563 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 C19orf60Q96EN9 201 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 APOPT1Q96IL0 206 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 PELOQ9BRX2 385 aaKnown RBP15.17■□□□□ 0.02
SMPD4-207ENST00000435455 OXSMQ9NWU1 459 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 VPS29Q9UBQ0 182 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 PCDHGB6Q9Y5F9 930 aa15.17■□□□□ 0.02
SMPD4-207ENST00000435455 MYOCOSA0A1B0GUC4 107 aa15.16■□□□□ 0.02
SMPD4-207ENST00000435455 A0A1W2PR48 441 aa15.16■□□□□ 0.02
SMPD4-207ENST00000435455 FCHO1O14526 889 aa15.16■□□□□ 0.02
SMPD4-207ENST00000435455 DYRK3O43781 588 aa15.16■□□□□ 0.02
SMPD4-207ENST00000435455 GUCY1B2O75343 617 aa15.16■□□□□ 0.02
SMPD4-207ENST00000435455 ULK1O75385 1050 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms