RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 J3KTA2 159 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 HPGDSO60760 199 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 MTRF1O75570 445 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 STC2O76061 302 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 C1QCP02747 245 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 CLTBP09497 229 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 OR56A5P0C7T3 313 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ATXN1LP0C7T5 689 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PBLDP30039 288 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RPL35P42766 123 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 SOX9P48436 509 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 AP1S1P61966 158 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 SEMG2Q02383 582 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ZNF697Q5TEC3 545 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 MZT2AQ6P582 158 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 CERS6Q6ZMG9 384 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 DEF8Q6ZN54 512 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TMCO2Q7Z6W1 182 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PDZD3Q86UT5 571 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 YAF2Q8IY57 180 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TCTE3Q8IZS6 198 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RNF175Q8N4F7 328 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 UXS1Q8NBZ7 420 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 KREMEN2Q8NCW0 462 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 OR4A15Q8NGL6 344 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RNF170Q96K19 258 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 NELL2Q99435 816 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TMED9Q9BVK6 235 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 MND1Q9BWT6 205 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ERVMER34-1Q9H9K5 563 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 C12orf10Q9HB07 376 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 KLHL1Q9NR64 748 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RBFOX1Q9NWB1 397 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 V9GYH0 126 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PLXNB2O15031 1838 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 C2orf78A6NCI8 922 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 H0YC42 278 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ADAM12O43184 909 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 KDELR3O43731 214 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TLX2O43763 284 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 KDM4BO94953 1096 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 HRGP04196 525 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 DNASE1P24855 282 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ACVR2AP27037 513 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 HOXC8P31273 242 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ETV6P41212 452 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 VEGFBP49765 207 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 CLDN8P56748 225 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 IRF8Q02556 426 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RGS1Q08116 209 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 LEXMQ3ZCV2 418 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 IDNKQ5T6J7 187 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 CPTPQ5TA50 214 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PAQR6Q6TCH4 344 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 LIMS2Q7Z4I7 341 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 SDR16C5Q8N3Y7 309 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 SYT14Q8NB59 555 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 BEST4Q8NFU0 473 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 OR5AK3PQ8NH89 298 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 DNAJB8Q8NHS0 232 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PIGKQ92643 395 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 DOHHQ9BU89 302 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TSSK6Q9BXA6 273 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 C1QTNF7Q9BXJ2 289 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 RBCK1Q9BYM8 510 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 BARHL1Q9BZE3 327 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ABCG5Q9H222 651 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 ZNF226Q9NYT6 803 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 SLC6A14Q9UN76 642 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 CLCA2Q9UQC9 943 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 TRAPPC4Q9Y296 219 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 YARS2Q9Y2Z4 477 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 INSL5Q9Y5Q6 135 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 PARP14Q460N5 1801 aa7.09□□□□□ -1.27
SYNPO2-203ENST00000434046 FAM227AF5H4B4 570 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 M0R233 179 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 PCDH17O14917 1159 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 PROS1P07225 676 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 ALPIP09923 528 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 ANXA3P12429 323 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 SDHBP21912 280 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 LHCGRP22888 699 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 HLA-DMAP28067 261 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 NUP62P37198 522 aaPredicted RBP7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 TIAL1Q01085 375 aaKnown RBP eCLIP7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 KRT33BQ14525 404 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 MBTPS1Q14703 1052 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 SSX1Q16384 188 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 ATP13A5Q4VNC0 1218 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 ZBTB37Q5TC79 503 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 CBLL1Q75N03 491 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 MARCH9Q86YJ5 346 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 RDH10Q8IZV5 341 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 SRFBP1Q8NEF9 429 aaKnown RBP7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 FAM46DQ8NEK8 389 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 APIPQ96GX9 242 aa7.09□□□□□ -1.28
SYNPO2-203ENST00000434046 NXF2Q9GZY0 626 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms