RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ANKRD27Q96NW4 1050 aa2.53□□□□□ -2
CLK1-204ENST00000432425 TSSK2Q96PF2 358 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ALKBH3Q96Q83 286 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 APOL2Q9BQE5 337 aa2.53□□□□□ -2
CLK1-204ENST00000432425 LZTS2Q9BRK4 669 aa2.53□□□□□ -2
CLK1-204ENST00000432425 PFDN4Q9NQP4 134 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ZMAT5Q9UDW3 170 aaKnown RBP2.53□□□□□ -2
CLK1-204ENST00000432425 PCSK1NQ9UHG2 260 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SH3BGRL2Q9UJC5 107 aa2.53□□□□□ -2
CLK1-204ENST00000432425 MGAT4AQ9UM21 535 aa2.53□□□□□ -2
CLK1-204ENST00000432425 NAALAD2Q9Y3Q0 740 aa2.53□□□□□ -2
CLK1-204ENST00000432425 KLK4Q9Y5K2 254 aa2.53□□□□□ -2
CLK1-204ENST00000432425 A4D1N5 150 aa2.53□□□□□ -2
CLK1-204ENST00000432425 CTAGE5O15320 804 aa2.53□□□□□ -2
CLK1-204ENST00000432425 KINO60870 393 aaKnown RBP2.53□□□□□ -2
CLK1-204ENST00000432425 QDPRP09417 244 aa2.53□□□□□ -2
CLK1-204ENST00000432425 HSPA5P11021 654 aaKnown RBP2.53□□□□□ -2
CLK1-204ENST00000432425 SFTPCP11686 197 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SCG2P13521 617 aa2.53□□□□□ -2
CLK1-204ENST00000432425 TMOD1P28289 359 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ATP5DP30049 168 aa2.53□□□□□ -2
CLK1-204ENST00000432425 GMPSP49915 693 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 SLC12A3P55017 1021 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ACTN3Q08043 901 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 KLHL30Q0D2K2 578 aa2.53□□□□□ -2
CLK1-204ENST00000432425 LRRC74AQ0VAA2 488 aa2.53□□□□□ -2
CLK1-204ENST00000432425 TFCP2Q12800 502 aa2.53□□□□□ -2
CLK1-204ENST00000432425 CNTN1Q12860 1018 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ITPK1Q13572 414 aa2.53□□□□□ -2
CLK1-204ENST00000432425 MAJINQ3KP22 176 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SLC27A4Q6P1M0 643 aa2.53□□□□□ -2
CLK1-204ENST00000432425 HIPK1Q86Z02 1210 aa2.53□□□□□ -2
CLK1-204ENST00000432425 HEXDCQ8WVB3 486 aa2.53□□□□□ -2
CLK1-204ENST00000432425 TEKT1Q969V4 418 aa2.53□□□□□ -2
CLK1-204ENST00000432425 RFT1Q96AA3 541 aa2.53□□□□□ -2
CLK1-204ENST00000432425 CNDP1Q96KN2 507 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ACAT2Q9BWD1 397 aa2.53□□□□□ -2
CLK1-204ENST00000432425 PINK1Q9BXM7 581 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SLITRK2Q9H156 845 aa2.53□□□□□ -2
CLK1-204ENST00000432425 C5orf66Q9H5L9 145 aa2.53□□□□□ -2
CLK1-204ENST00000432425 THYN1Q9P016 225 aa2.53□□□□□ -2
CLK1-204ENST00000432425 V9GYY5 206 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 TDRD6O60522 2096 aaKnown RBP2.53□□□□□ -2.01
CLK1-204ENST00000432425 ZCCHC6Q5VYS8 1495 aaKnown RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 C2orf92A0A1B0GVN3 265 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 BCLAF3A2AJT9 711 aaKnown RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 HAT1O14929 419 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 MLNRO43193 412 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 FCGR3BO75015 233 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 SNX4O95219 450 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 ANGPTL1O95841 491 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 SP9P0CG40 484 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 PDGFRAP16234 1089 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 CRKLP46109 303 aaKnown RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 ARFIP1P53367 373 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 PEX3P56589 373 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 PPIAP62937 165 aaKnown RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 BFSP1Q12934 665 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 CAVIN1Q6NZI2 390 aaKnown RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 ZCCHC12Q6PEW1 402 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 CCDC91Q7Z6B0 441 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 Q8N7P7 452 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 OR1B1Q8NGR6 318 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 GDAP1Q8TB36 358 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 CYYR1Q96J86 154 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 SPATA17Q96L03 361 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 FER1L6-AS2Q96M78 137 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 RUNDC3BQ96NL0 473 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 MGME1Q9BQP7 344 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 SLC39A3Q9BRY0 314 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 TCHPQ9BT92 498 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 TRIM7Q9C029 511 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 PLEKHA3Q9HB20 300 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 RAB9BQ9NP90 201 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 UBE2TQ9NPD8 197 aaPredicted RBP2.52□□□□□ -2.01
CLK1-204ENST00000432425 ABCB10Q9NRK6 738 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 CTNNA3Q9UI47 895 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 DUSP12Q9UNI6 340 aa2.52□□□□□ -2.01
CLK1-204ENST00000432425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.51□□□□□ -2.01
CLK1-204ENST00000432425 CENPJQ9HC77 1338 aaPredicted RBP2.51□□□□□ -2.01
CLK1-204ENST00000432425 A0A087WV48 116 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 A0A0U1RQK1 487 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 ZNF320A2RRD8 509 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 IGLON5A6NGN9 336 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 NEFHP12036 1026 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 CCNCP24863 283 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 PTAFRP25105 342 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 PSMB4P28070 264 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 SPRP35270 261 aaPredicted RBP2.51□□□□□ -2.01
CLK1-204ENST00000432425 STARD6P59095 220 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 LYZP61626 148 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 RBBP4Q09028 425 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 FASTKQ14296 549 aaKnown RBP2.51□□□□□ -2.01
CLK1-204ENST00000432425 RFTN2Q52LD8 501 aaPredicted RBP2.51□□□□□ -2.01
CLK1-204ENST00000432425 PRR30Q53SZ7 412 aaPredicted RBP2.51□□□□□ -2.01
CLK1-204ENST00000432425 ARMCX4Q5H9R4 360 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 SHEQ5VZ18 495 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 TXNRD3NBQ6F5E7 133 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 IYDQ6PHW0 289 aa2.51□□□□□ -2.01
CLK1-204ENST00000432425 C17orf107Q6ZR85 190 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms