RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 LMO2P25791 158 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 CALML3P27482 149 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 MARCKSP29966 332 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 PPP2R1BP30154 601 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 ALDH1B1P30837 517 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 SPRP35270 261 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 NSFP46459 744 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 SERPINH1P50454 418 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 TRA2BP62995 288 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 FKBP1BP68106 108 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 CCZ1BP86790 482 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 CCZ1P86791 482 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 IL9RQ01113 521 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 NPRL3Q12980 569 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 MTF1Q14872 753 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 ZNF146Q15072 292 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 SPHARQ15513 63 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 FAM189A2Q15884 450 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 AGAP7PQ5VUJ5 663 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 LYPLAL1Q5VWZ2 237 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 REP15Q6BDI9 236 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 HIST2H2AA3Q6FI13 130 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 SPINK14Q6IE38 97 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 TMEM64Q6YI46 380 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 C17orf107Q6ZR85 190 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 Q71RC1 249 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 MIER3Q7Z3K6 550 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 LAX1Q8IWV1 398 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 AQP12AQ8IXF9 295 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 ZNF843Q8N446 348 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 BANPQ8N9N5 519 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 HAS2Q92819 552 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 HIST1H2ACQ93077 130 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 PTP4A1Q93096 173 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 TOMM40LQ969M1 308 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 CCDC47Q96A33 483 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 NEDD4LQ96PU5 975 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 IWS1Q96ST2 819 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 CABLES2Q9BTV7 478 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 TEX13AQ9BXU3 409 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 ALDH8A1Q9H2A2 487 aaPredicted RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.77□□□□□ -2.13
CDC40-204ENST00000431461 ASIC3Q9UHC3 531 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 MGAT4AQ9UM21 535 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 EXOC7Q9UPT5 735 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 TMED7Q9Y3B3 224 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 MRPL11Q9Y3B7 192 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 KNSTRNQ9Y448 316 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 HBS1LQ9Y450 684 aaKnown RBP1.77□□□□□ -2.13
CDC40-204ENST00000431461 ATG4BQ9Y4P1 393 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 SNX5Q9Y5X3 404 aa1.77□□□□□ -2.13
CDC40-204ENST00000431461 COL5A2P05997 1499 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 FGD5Q6ZNL6 1462 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SPAG9O60271 1321 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 NPIPA5A0A0B4J1W7 369 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 A0A1W2PRV1 198 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 MEX3AA1L020 520 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 ARHGEF33A8MVX0 844 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 NPIPA5E9PKD4 350 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SLC28A1O00337 649 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 EEF2KO00418 725 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 FBP2O00757 339 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SIGLEC5O15389 551 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 BUB1O43683 1085 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 TLX2O43763 284 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 TSPAN2O60636 221 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ATP6V1G1O75348 118 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SH3BGRLO75368 114 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 IGHV3-13P01766 116 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 IGHG1P01857 330 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 GSTA1P08263 222 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 H2AFZP0C0S5 128 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SBK2P0C263 348 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 DLATP10515 647 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 PRG2P13727 222 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 STMN1P16949 149 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 GEMP55040 296 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 IRX6P78412 446 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 PAX8Q06710 450 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 PPP1R8Q12972 351 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 RPA4Q13156 261 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 NME3Q13232 169 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 KRT31Q15323 416 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 OR1C1Q15619 314 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 TRADDQ15628 312 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ZNF239Q16600 458 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 POM121L1PQ3SYA9 428 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 RSBN1Q5VWQ0 802 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 PODNL1Q6PEZ8 512 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 PAQR6Q6TCH4 344 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 NHLRC1Q6VVB1 395 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 TOM1L2Q6ZVM7 507 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ASRGL1Q7L266 308 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ZNF410Q86VK4 478 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 P2RY8Q86VZ1 359 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 CARM1Q86X55 608 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 OR4N5Q8IXE1 308 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SMYD1Q8NB12 490 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 CSNK1G2-AS1Q8NCQ2 148 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms