RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TMEM25Q86YD3 366 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 ZCCHC10Q8TBK6 192 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 C16orf78Q8WTQ4 265 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 C1QTNF3Q9BXJ4 246 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 OR2B2Q9GZK3 357 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 CARS2Q9HA77 564 aaKnown RBP12.09□□□□□ -0.47
CPNE4-201ENST00000429747 PPT2Q9UMR5 302 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 TTC3P53804 2025 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
CPNE4-201ENST00000429747 ANHXE9PGG2 379 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 H7C0S8 307 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 ENTPD6O75354 484 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 RAB8AP61006 207 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 PLAG1Q6DJT9 500 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 METTL2BQ6P1Q9 378 aaKnown RBP12.08□□□□□ -0.47
CPNE4-201ENST00000429747 HSDL2Q6YN16 418 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.47
CPNE4-201ENST00000429747 PEX5LQ8IYB4 626 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 P2RY12Q9H244 342 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 ADAP2Q9NPF8 381 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 TLR9Q9NR96 1032 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 TNFRSF10DQ9UBN6 386 aa12.08□□□□□ -0.47
CPNE4-201ENST00000429747 NUFIP1Q9UHK0 495 aaKnown RBP12.08□□□□□ -0.47
CPNE4-201ENST00000429747 SSC5DA1L4H1 1573 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 A0A1W2PQL4 384 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 MRPS14O60783 128 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 WBP4O75554 376 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ADORA3P0DMS8 318 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 RGS1Q08116 209 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 PIN1Q13526 163 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 FRMPD2BQ6IN97 320 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 VRK3Q8IV63 474 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 CXorf40BQ96DE9 158 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 SORBS1Q9BX66 1292 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 RACGAP1Q9H0H5 632 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 RNF167Q9H6Y7 350 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 GPR52Q9Y2T5 361 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ABHD14A-ACY1A0A1B0GW23 586 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ADAM23O75077 832 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 SULT1C4O75897 302 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 GSTM3P21266 225 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 TNFSF8P32971 234 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 NOGQ13253 232 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 SLC35F1Q5T1Q4 408 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 KDM4DQ6B0I6 523 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ADAMTS16Q8TE57 1224 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 HDHD5Q9BXW7 423 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 SLITRK2Q9H156 845 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 BTNL2Q9UIR0 455 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 TTC34A8MYJ7 566 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 FAAHO00519 579 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ANKRD28O15084 1053 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 OR10H2O60403 315 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 KHDRBS3O75525 346 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ABATP80404 500 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 INAVAQ3KP66 663 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 CDKL4Q5MAI5 379 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 XAF1Q6GPH4 301 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 RSPO2Q6UXX9 243 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 MEX3DQ86XN8 651 aaKnown RBP12.08□□□□□ -0.48
CPNE4-201ENST00000429747 Q8N402 240 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 GPR151Q8TDV0 419 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 POF1BQ8WVV4 589 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 IFT27Q9BW83 186 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 VNN3Q9NY84 501 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 STUB1Q9UNE7 303 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 ITM2BQ9Y287 266 aa12.08□□□□□ -0.48
CPNE4-201ENST00000429747 A0A1B0GW55 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 SH3D21A4FU49 640 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 FAM172BPA6NC97 362 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 EIF3FO00303 357 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-201ENST00000429747 KLK8O60259 260 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 B4GALT3O60512 393 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 PRR35P0CG20 571 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L2P0CJ85 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L3P0CJ86 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L4P0CJ87 422 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L5P0CJ88 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L6P0CJ89 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 DUX4L7P0CJ90 424 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 CSNK2A2P19784 350 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF10P21506 573 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-201ENST00000429747 MAP2K3P46734 347 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 NRIP1P48552 1158 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 CTSCP53634 463 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-201ENST00000429747 RTN4RL1Q86UN2 441 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-201ENST00000429747 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
CPNE4-201ENST00000429747 TRAM1L1Q8N609 369 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms