RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PRLP01236 227 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 EPGNQ6UW88 154 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 COMMD6Q7Z4G1 85 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 LMNTD1Q8N9Z9 388 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 NEIL2Q969S2 332 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 GAL3ST1Q99999 423 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 NLGN3Q9NZ94 848 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 KCMF1Q9P0J7 381 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 RIMKLBQ9ULI2 386 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 LRP5O75197 1615 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 EVPLQ92817 2033 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 A0A1W2PRG6 482 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 H0Y8X5 98 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 MNDAP41218 407 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 GRB7Q14451 532 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 STEAP4Q687X5 459 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 SATL1Q86VE3 508 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 PACS2Q86VP3 889 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 SERINC2Q96SA4 455 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 OR51I1Q9H343 314 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 SOX17Q9H6I2 414 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 MARCH7Q9H992 704 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 GRHPRQ9UBQ7 328 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 TBX1O43435 398 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 RCBTB2O95199 551 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 FARS2O95363 451 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 PRLHRP49683 370 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 ADPRHP54922 357 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 ISCA2Q86U28 154 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 SMPD3Q9NY59 655 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 MRPL39Q9NYK5 338 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 NAALAD2Q9Y3Q0 740 aa16.33■□□□□ 0.2
SMARCA4-203ENST00000429416 NSG1A0A0A6YYJ2 146 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CHRM5P08912 532 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PLP2Q04941 152 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CHAF1BQ13112 559 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 SERTAD2Q14140 314 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PRPF38BQ5VTL8 546 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PHTF2Q8N3S3 785 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 SYNPOQ8N3V7 929 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CHST4Q8NCG5 386 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 OR56A3Q8NH54 315 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 WBP2Q969T9 261 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 B4GALT3O60512 393 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CD2P06729 351 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 EEF1A2Q05639 463 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 RASGEF1BQ0VAM2 473 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 DENND6BQ8NEG7 585 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CD180Q99467 661 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 DAPL1A0PJW8 107 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 NARSO43776 548 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 LYNP07948 512 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 S100GP29377 79 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 SIX1Q15475 284 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 Q6ZS52 159 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PRR22Q8IZ63 422 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CHMP1AQ9HD42 196 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PNPLA3Q9NST1 481 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 DNAJB9Q9UBS3 223 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 ANGPTL1O95841 491 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 IL9P15248 144 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 MMP12P39900 470 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 ADAM15Q13444 863 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 C5orf22Q49AR2 442 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 CARD17Q5XLA6 110 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 C6orf120Q7Z4R8 191 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 ZZZ3Q8IYH5 903 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 EHD1Q9H4M9 534 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 TM7SF3Q9NS93 570 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 A0A075B6Q4 140 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 DFNA5O60443 496 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 FGF3P11487 239 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 GSK3BP49841 420 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 RCAN2Q14206 197 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 PGBD5Q8N414 524 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 RHBDF1Q96CC6 855 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 MEAF6Q9HAF1 191 aa16.32■□□□□ 0.2
SMARCA4-203ENST00000429416 C2orf92A0A1B0GVN3 265 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 ARPC2O15144 300 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 CPNE6O95741 557 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 HMGN1P05114 100 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 CCSAPQ6IQ19 270 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 ZNF551Q7Z340 670 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 AMER2Q8N7J2 671 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 OR7G3Q8NG95 312 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 ACSL6Q9UKU0 697 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 IFT52Q9Y366 437 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 ANXA8P13928 327 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 CAPGP40121 348 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 CLRN1P58418 232 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 IKBIPQ70UQ0 350 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 ZNF765Q7L2R6 523 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 HSPBAP1Q96EW2 488 aa16.31■□□□□ 0.2
SMARCA4-203ENST00000429416 TRAPPC9Q96Q05 1148 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms