RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 ACPPP15309 386 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 TLX1P31314 330 aaPredicted RBP12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 EEF1A2Q05639 463 aaKnown RBP12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 RIPOR1Q6ZS17 1223 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 CLNKQ7Z7G1 428 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 KIRREL3Q8IZU9 778 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 NACC2Q96BF6 587 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 CATSPER2Q96P56 530 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 IP6K3Q96PC2 410 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 LRTM1Q9HBL6 345 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 C1orf109Q9NX04 203 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 P4HTMQ9NXG6 502 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 MCM8Q9UJA3 840 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 HAO1Q9UJM8 370 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 POLR3HQ9Y535 204 aaPredicted RBP12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 SPTA1P02549 2419 aa12.12□□□□□ -0.47
BX088651.4-202ENST00000428895 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 IGHV3-20A0A0C4DH32 117 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 MYOCOSA0A1B0GUC4 107 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 ARGFXA6NJG6 315 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 WASHC1A8K0Z3 465 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 MASP2O00187 686 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 LSM1O15116 133 aaKnown RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 PEX11AO75192 247 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 MYO1DO94832 1006 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 AIFM1O95831 613 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 NR2F6P10588 404 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 PRPH2P23942 346 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 TIA1P31483 386 aaKnown RBP eCLIP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 HSD17B7P56937 341 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 RPL38P63173 70 aaKnown RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 CHAF1BQ13112 559 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 XKR7Q5GH72 579 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 NDUFAF5Q5TEU4 345 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 NOXRED1Q6NXP6 359 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 TMEM205Q6UW68 189 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 MED25Q71SY5 747 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 CDC26Q8NHZ8 85 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 CKAP2Q8WWK9 683 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 EXTL1Q92935 676 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 UCN3Q969E3 161 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 TM4SF18Q96CE8 201 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 TUBGCP3Q96CW5 907 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 C11orf24Q96F05 449 aaPredicted RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 CCT7Q99832 543 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 SEMA4CQ9C0C4 833 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 RIC8BQ9NVN3 520 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
BX088651.4-202ENST00000428895 TNRC6AQ8NDV7 1962 aaKnown RBP12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 TGFBR3LH3BV60 316 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 PCDH17O14917 1159 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 CTNSO60931 367 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 GUCY1B2O75343 617 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 CYC1P08574 325 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 ALDH9A1P49189 494 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 TAS2R50P59544 299 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 ID2Q02363 134 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 STX4Q12846 297 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 LY6DQ14210 128 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 KIAA0040Q15053 153 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 TBR1Q16650 682 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 ATP6AP1LQ52LC2 224 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 RFTN2Q52LD8 501 aaPredicted RBP12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 CPZQ66K79 652 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 CPEB2Q7Z5Q1 589 aaKnown RBP12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 CRLF3Q8IUI8 442 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 SCUBE1Q8IWY4 988 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 OR4N5Q8IXE1 308 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 MMP21Q8N119 569 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 C16orf78Q8WTQ4 265 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 METTL2AQ96IZ6 378 aaKnown RBP12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 VPS50Q96JG6 964 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 PPP3R2Q96LZ3 170 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 SIRT5Q9NXA8 310 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 DLGAP4Q9Y2H0 992 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
BX088651.4-202ENST00000428895 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
BX088651.4-202ENST00000428895 LOC102723996A0A087X1L8 192 aa12.09□□□□□ -0.47
BX088651.4-202ENST00000428895 IGKV3D-11A0A0A0MRZ8 115 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms