RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CD200R1Q8TD46 325 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 USP7Q93009 1102 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 CDKN2AIPNLQ96HQ2 116 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 UBL7Q96S82 380 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 DPH7Q9BTV6 452 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PITHD1Q9GZP4 211 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 ABCG5Q9H222 651 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PDGFCQ9NRA1 345 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 NUDT15Q9NV35 164 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PURGQ9UJV8 347 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PPIEQ9UNP9 301 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 SF3B6Q9Y3B4 125 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 TEX13CA0A0J9YWL9 993 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 TLR4O00206 839 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PDCD5O14737 125 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 FPGTO14772 594 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 B3GALT4O96024 378 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PLATP00750 562 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 HRGP04196 525 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PKMP14618 531 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 MAXP61244 160 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 SELENOWP63302 87 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 CYP4F8P98187 520 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 FGL1Q08830 312 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RBBP4Q09028 425 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 MPEG1Q2M385 716 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 FAM198BQ6UWH4 519 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 C17orf107Q6ZR85 190 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 BHLHA9Q7RTU4 235 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 ATAD1Q8NBU5 361 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 OR9Q2Q8NGE9 314 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 SPPL2AQ8TCT8 520 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 EDEM1Q92611 657 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RFT1Q96AA3 541 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 SFXN2Q96NB2 322 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 THSD1Q9NS62 852 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 EMC3Q9P0I2 261 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 ING1Q9UK53 422 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RAI2Q9Y5P3 530 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 TRAV6A0A075B6T7 132 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 MAGEB17A8MXT2 336 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 G3V3Q6 166 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 FFAR3O14843 346 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 SYN3O14994 580 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 GPR42O15529 346 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 GLUD1P00367 558 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 ADRB1P08588 477 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 PRSS56P0CW18 603 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CALCRP30988 508 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 PCGF2P35227 344 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 AVPR1BP47901 424 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 LIMS1P48059 325 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CTBP2P56545 445 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 VSX2P58304 361 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 MAP4K2Q12851 820 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 TPBGQ13641 420 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 TNFAIP1Q13829 316 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 NTRK2Q16620 822 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 C18orf21Q32NC0 220 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 MARC1Q5VT66 337 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CORO6Q6QEF8 472 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 KANSL1Q7Z3B3 1105 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 MCATQ8IVS2 390 aaKnown RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 OR52J3Q8NH60 311 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 DPH2Q9BQC3 489 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CYB5R1Q9UHQ9 305 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 ZFR2Q9UPR6 939 aaKnown RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 DLGAP4Q9Y2H0 992 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 SPIN1Q9Y657 262 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 DSPPQ9NZW4 1301 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 OR6C65A6NJZ3 312 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 H7C2Y5 167 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CASKO14936 926 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 LPLP06858 475 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 SMPD1P17405 629 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 RHCEP18577 417 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 KIR3DL1P43629 444 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 HMGA2P52926 109 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 BACE1P56817 501 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 RPS25P62851 125 aaKnown RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CRTC2Q53ET0 693 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 IFI44LQ53G44 452 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 PDSS1Q5T2R2 415 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 ARTNQ5T4W7 220 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 CD200R1LQ6Q8B3 271 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 MAMSTRQ6ZN01 415 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 TMEM151BQ8IW70 566 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 GPR65Q8IYL9 337 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 TOP6BLQ8N6T0 577 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 SYT14Q8NB59 555 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 ARRDC2Q8TBH0 407 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 TMEM203Q969S6 136 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 C1GALT1C1Q96EU7 318 aa15.36■□□□□ 0.05
C9orf3-206ENST00000428313 SENP5Q96HI0 755 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-206ENST00000428313 PPP1R16BQ96T49 567 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms