RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MAGEA12P43365 314 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 GPR85P60893 370 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 SERTAD2Q14140 314 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.11■□□□□ 0.333e-6■□□□□ 9.1
PSPC1-202ENST00000427943 KRTCAP3Q53RY4 240 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 MDGA2Q7Z553 956 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 SULF2Q8IWU5 870 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 OR14A16Q8NHC5 309 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 ITLN2Q8WWU7 325 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-202ENST00000427943 RGMAQ96B86 450 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 ANKRD9Q96BM1 317 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-202ENST00000427943 PHF21BQ96EK2 531 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 SCYL1Q96KG9 808 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 CDK15Q96Q40 435 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 ADGRE2Q9UHX3 823 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 RNF11Q9Y3C5 154 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 PCDHGA11Q9Y5H2 935 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 IKBKGQ9Y6K9 419 aa17.11■□□□□ 0.33
PSPC1-202ENST00000427943 C17orf105B2RV13 164 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 PRSS44E7EML9 344 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 ASNA1O43681 348 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 PTGER1P34995 402 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 SERPINB9P50453 376 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 HK2P52789 917 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 CASP6P55212 293 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 HNRNPH2P55795 449 aaKnown RBP17.1■□□□□ 0.33
PSPC1-202ENST00000427943 PHEXP78562 749 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 C18orf63Q68DL7 685 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 HSDL2Q6YN16 418 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 TAOK1Q7L7X3 1001 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 GHDCQ8N2G8 530 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 SLC2A12Q8TD20 617 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 DCAKDQ8WVC6 231 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 ASB15Q8WXK1 588 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 ISL2Q96A47 359 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 CENPKQ9BS16 269 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 XPR1Q9UBH6 696 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 ERVK-11Q9UQG0 969 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF835Q9Y2P0 537 aa17.1■□□□□ 0.33
PSPC1-202ENST00000427943 YARS2Q9Y2Z4 477 aaKnown RBP17.1■□□□□ 0.33
PSPC1-202ENST00000427943 TNPO3Q9Y5L0 923 aaKnown RBP17.1■□□□□ 0.33
PSPC1-202ENST00000427943 CACNA1CQ13936 2221 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 A8MVJ9 347 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 TRIM49D1C9J1S8 452 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 H0YIV9 168 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 OR7A17O14581 309 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 TFECO14948 347 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 PEX1O43933 1283 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 UGDHO60701 494 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 EEDO75530 441 aaKnown RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 OR6B1O95007 311 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 ETHE1O95571 254 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 ABOP16442 354 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 SOX3P41225 446 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 NEK2P51955 445 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 TNFRSF17Q02223 184 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 IL20RBQ6UXL0 311 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 NCCRP1Q6ZVX7 275 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 MRGPRGQ86SM5 289 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 GPR180Q86V85 440 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 SPPL2CQ8IUH8 684 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 OR52B6Q8NGF0 335 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 WDR20Q8TBZ3 569 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 REPS1Q96D71 796 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 NSUN5Q96P11 429 aaKnown RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 DGAT2Q96PD7 388 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 RASL10BQ96S79 203 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF717Q9BY31 904 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 RPF2Q9H7B2 306 aaKnown RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 NOL11Q9H8H0 719 aaKnown RBP17.09■□□□□ 0.33
PSPC1-202ENST00000427943 HPF1Q9NWY4 346 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 MYOTQ9UBF9 498 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 PHF11Q9UIL8 331 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 TSC22D4Q9Y3Q8 395 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
PSPC1-202ENST00000427943 NOTCH2Q04721 2471 aa17.08■□□□□ 0.33
PSPC1-202ENST00000427943 ZNF407Q9C0G0 2248 aa17.08■□□□□ 0.33
PSPC1-202ENST00000427943 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.32
PSPC1-202ENST00000427943 KLRC4-KLRK1H3BQV0 150 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 KRT38O76015 456 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 RBP1P09455 135 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 FOLH1Q04609 750 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 GLE1Q53GS7 698 aaKnown RBP17.08■□□□□ 0.32
PSPC1-202ENST00000427943 Q6ZPB1 254 aaPredicted RBP17.08■□□□□ 0.32
PSPC1-202ENST00000427943 ZCCHC7Q8N3Z6 543 aaKnown RBP17.08■□□□□ 0.32
PSPC1-202ENST00000427943 L3MBTL4Q8NA19 623 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 POGLUT1Q8NBL1 392 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 PSD4Q8NDX1 1056 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 DOK4Q8TEW6 326 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 MTFMTQ96DP5 389 aaKnown RBP17.08■□□□□ 0.32
PSPC1-202ENST00000427943 TIMMDC1Q9NPL8 285 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 DEPPQ9NTK1 212 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 COPS7AQ9UBW8 275 aa17.08■□□□□ 0.32
PSPC1-202ENST00000427943 PCTPQ9UKL6 214 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms