RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 ZNF480Q8WV37 535 aa8.26□□□□□ -1.09
USP40-203ENST00000427112 SLC46A2Q9BY10 475 aa8.26□□□□□ -1.09
USP40-203ENST00000427112 SLC7A5P2Q9GIP4 190 aa8.26□□□□□ -1.09
USP40-203ENST00000427112 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP40-203ENST00000427112 EGLN3Q9H6Z9 239 aa8.26□□□□□ -1.09
USP40-203ENST00000427112 SCN10AQ9Y5Y9 1956 aa8.26□□□□□ -1.09
USP40-203ENST00000427112 NLRC5Q86WI3 1866 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 TP53BP1Q12888 1972 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 CLDN24A6NM45 220 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 LEFTY2O00292 366 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 MAGEB4O15481 346 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 AKR7A2O43488 359 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 LZTS3O60299 673 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 PLOD3O60568 738 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 LRG1P02750 347 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 INHAP05111 366 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 PSKH1P11801 424 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 JUPP14923 745 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 APEX1P27695 318 aaKnown RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 PPM1FP49593 454 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 LRRC32Q14392 662 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CRTC2Q53ET0 693 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 USP43Q70EL4 1123 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 RD3Q7Z3Z2 195 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 HORMAD2Q8N7B1 307 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 DCAF4L2Q8NA75 395 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SLC43A3Q8NBI5 491 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CLP1Q92989 425 aaKnown RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 ALG14Q96F25 216 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 IGSF21Q96ID5 467 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CERS4Q9HA82 394 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 NECTIN3Q9NQS3 549 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 STMN3Q9NZ72 180 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 OSGIN1Q9UJX0 560 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 EXO1Q9UQ84 846 aaKnown RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 TMED5Q9Y3A6 229 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 INSL5Q9Y5Q6 135 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 KCNE2Q9Y6J6 123 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 OR6C70A6NIJ9 312 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CD8B2A6NJW9 211 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CD8BP10966 210 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 PRKACAP17612 351 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SDC2P34741 201 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SOX6P35712 828 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 GGT2P36268 569 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 OPRD1P41143 372 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CDC42P60953 191 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SELENOWP63302 87 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 TMEM115Q12893 351 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 SSX1Q16384 188 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF284Q2VY69 593 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF791Q3KP31 576 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 IQCCQ4KMZ1 466 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CASP12Q6UXS9 341 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 TMPRSS11AQ6ZMR5 421 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CHST9Q7L1S5 443 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SLC46A3Q7Z3Q1 461 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 IQCHQ86VS3 1027 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF614Q8N883 585 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF557Q8N988 423 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 PEX13Q92968 403 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SCRN2Q96FV2 425 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 BARHL1Q9BZE3 327 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 RHBGQ9H310 441 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CXorf36Q9H7Y0 433 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 FBXL12Q9NXK8 326 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 OR51B4Q9Y5P0 310 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 A0A1W2PQ72 361 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZNF197O14709 1029 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 AVPR1BP47901 424 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ITGA1P56199 1179 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 RUNX1T1Q06455 604 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SLC9A5Q14940 896 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SNAPC1Q16533 368 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 LRIF1Q5T3J3 769 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 PLPP4Q5VZY2 271 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ERAP2Q6P179 960 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 MACC1Q6ZN28 852 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 OR4N5Q8IXE1 308 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 C12orf76Q8N812 135 aaPredicted RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 OR4D11Q8NGI4 311 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 CSGALNACT1Q8TDX6 532 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ASB12Q8WXK4 309 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 ZG16BQ96DA0 208 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 FCRL4Q96PJ5 515 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 YME1L1Q96TA2 773 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 POLR2J3Q9H1A7 115 aaKnown RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 TAS2R9Q9NYW1 312 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 SPG21Q9NZD8 308 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 FBXW2Q9UKT8 454 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 TMCC3Q9ULS5 477 aa8.25□□□□□ -1.09
USP40-203ENST00000427112 RUVBL1Q9Y265 456 aaKnown RBP8.25□□□□□ -1.09
USP40-203ENST00000427112 PLXNA4Q9HCM2 1894 aa8.24□□□□□ -1.09
USP40-203ENST00000427112 ANHXE9PGG2 379 aa8.24□□□□□ -1.09
USP40-203ENST00000427112 TLR4O00206 839 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms