RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FAM129CQ86XR2 697 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 C1QTNF3Q9BXJ4 246 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 GABARAPO95166 117 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 OR12D1P0DN82 309 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 IMPA1P29218 277 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 OR2B6P58173 313 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 RACK1P63244 317 aaKnown RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 MESP2Q0VG99 397 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 BCL7AQ4VC05 210 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ZC3H12BQ5HYM0 836 aaKnown RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 SLC9A6Q92581 669 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 LRRC3BQ96PB8 259 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 BBS4Q96RK4 519 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 RTTNQ86VV8 2226 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 EIF2S1P05198 315 aaKnown RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 INHBBP09529 407 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP42-203ENST00000426246 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ERVK-21P61565 698 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 SNRPD2P62316 118 aaKnown RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 OXA1LQ15070 435 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 GPR151Q8TDV0 419 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 GATAD2BQ8WXI9 593 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 TMED9Q9BVK6 235 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 NMNAT1Q9HAN9 279 aaPredicted RBP12.76□□□□□ -0.37
USP42-203ENST00000426246 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 CCNB1IP1Q9NPC3 277 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 GIMAP4Q9NUV9 329 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ZNF639Q9UID6 485 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 IFT52Q9Y366 437 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 FGF19O95750 216 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SHHQ15465 462 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SLC35F1Q5T1Q4 408 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 DHRS4L2Q6PKH6 230 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CBLL1Q75N03 491 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 METTL4Q8N3J2 472 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 VN1R2Q8NFZ6 395 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 ADAMTS16Q8TE57 1224 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 PDLIM5Q96HC4 596 aaKnown RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 ZCCHC3Q9NUD5 404 aaKnown RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 CUEDC1Q9NWM3 386 aaPredicted RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 KCNK6Q9Y257 313 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CLCA1A8K7I4 914 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 H7C0S8 307 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 PBX2P40425 430 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 GSTM4Q03013 218 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CRTC2Q53ET0 693 aaPredicted RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 ZNF57Q68EA5 555 aaPredicted RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 MTFR2Q6P444 385 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 PRSS48Q7RTY5 328 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 GLCCI1Q86VQ1 547 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 OR2A12Q8NGT7 310 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 TDP1Q9NUW8 608 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
USP42-203ENST00000426246 NCR1O76036 304 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 IDSP22304 550 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP42-203ENST00000426246 SSR2P43308 183 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SLC15A1P46059 708 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 PPP5CP53041 499 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 WNT3P56703 355 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SELENOWP63302 87 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 IL18R1Q13478 541 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SYPL1Q16563 259 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 KLHL12Q53G59 568 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 DCST1Q5T197 706 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 LYPLAL1Q5VWZ2 237 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 ERAP2Q6P179 960 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 LAX1Q8IWV1 398 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 FAM9CQ8IZT9 166 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 RHOXF1Q8NHV9 184 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CCDC115Q96NT0 180 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 DOK1Q99704 481 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 SLC9A8Q9Y2E8 581 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 OR1A2Q9Y585 309 aa12.75□□□□□ -0.37
USP42-203ENST00000426246 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms