RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 CDCP1Q9H5V8 836 aa23.37■■□□□ 1.33
HTATSF1-202ENST00000425695 RPF2Q9H7B2 306 aaKnown RBP23.37■■□□□ 1.33
HTATSF1-202ENST00000425695 MS4A12Q9NXJ0 267 aa23.37■■□□□ 1.33
HTATSF1-202ENST00000425695 AHSPQ9NZD4 102 aa23.37■■□□□ 1.33
HTATSF1-202ENST00000425695 ASB4Q9Y574 426 aa23.37■■□□□ 1.33
HTATSF1-202ENST00000425695 TENM4Q6N022 2769 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 WASHC1A8K0Z3 465 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 PROM1O43490 865 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 KRT6AP02538 564 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 KRT6BP04259 564 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 TNNI3P19429 210 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 TLX1P31314 330 aaPredicted RBP23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 KRT6CP48668 564 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 TNFRSF17Q02223 184 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 KCNC4Q03721 635 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 MEP1AQ16819 746 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 CFAP157Q5JU67 520 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 MRM1Q6IN84 353 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 BEST3Q8N1M1 668 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 SLC5A8Q8N695 610 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 BANPQ8N9N5 519 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 B3GNT7Q8NFL0 401 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 UCN3Q969E3 161 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 SNRNP40Q96DI7 357 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 APOPT1Q96IL0 206 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 KCNA7Q96RP8 456 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 MID1IP1Q9NPA3 183 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 ADAP2Q9NPF8 381 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 OXSMQ9NWU1 459 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 LYARQ9NX58 379 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 STK38LQ9Y2H1 464 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 PLLPQ9Y342 182 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 TIMM22Q9Y584 194 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 PCDHGA10Q9Y5H3 936 aa23.36■■□□□ 1.33
HTATSF1-202ENST00000425695 A0A1W2PR48 441 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 BLACEA4D250 179 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 GLOD5A6NK44 160 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 FGF17O60258 216 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 BUD31P41223 144 aaPredicted RBP23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 TNFSF10P50591 281 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 PKNOX1P55347 436 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 KRT71Q3SY84 523 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 RPS19BP1Q86WX3 136 aaKnown RBP23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 C10orf107Q8IVU9 208 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 METTL4Q8N3J2 472 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 THAP3Q8WTV1 239 aaPredicted RBP23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 SREK1Q8WXA9 508 aaKnown RBP23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 NCLNQ969V3 563 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 DEFB126Q9BYW3 111 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 SLC29A3Q9BZD2 475 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 ASF1BQ9NVP2 202 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 ANKRD10Q9NXR5 420 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 VTI1BQ9UEU0 232 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 CLCA3PQ9Y6N3 262 aa23.35■■□□□ 1.33
HTATSF1-202ENST00000425695 RP1L1Q8IWN7 2480 aaPredicted RBP23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 TRBV11-1A0A0K0K1C0 115 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 UBFD1O14562 309 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 ULK1O75385 1050 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 CHN1P15882 459 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 HTR6P50406 440 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 DNAJB13P59910 316 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 SERTAD2Q14140 314 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 ELAVL1Q15717 326 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 CCNYL2Q5T2Q4 361 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 SCIMPQ6UWF3 145 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 TMEM132CQ8N3T6 1108 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 AGAP11Q8TF27 550 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 TANKQ92844 425 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 TMEM109Q9BVC6 243 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 SHCBP1LQ9BZQ2 653 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 BRF2Q9HAW0 419 aa23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 COPG1Q9Y678 874 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-202ENST00000425695 SHANK1Q9Y566 2161 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ARHGAP10A1A4S6 786 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 OR5H15A6NDH6 313 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ZIC2O95409 532 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ESRRBO95718 433 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ENO1P06733 434 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 TUBBP07437 444 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 CREB1P16220 341 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 TPP2P29144 1249 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 CLCN2P51788 898 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 FOLH1Q04609 750 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 TERF2Q15554 542 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 PAGE2Q7Z2X7 111 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ATCAYQ86WG3 371 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 APCDD1LQ8NCL9 501 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 PTPMT1Q8WUK0 201 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 PPWD1Q96BP3 646 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 FAM111AQ96PZ2 611 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 SMC6Q96SB8 1091 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 RNF32Q9H0A6 362 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 NMRK1Q9NWW6 199 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 ABI3Q9P2A4 366 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 SLC17A7Q9P2U7 560 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 MID2Q9UJV3 735 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 NTNG1Q9Y2I2 539 aa23.33■■□□□ 1.33
HTATSF1-202ENST00000425695 MYO18BQ8IUG5 2567 aa23.33■■□□□ 1.32
HTATSF1-202ENST00000425695 TRAV17A0A0B4J275 112 aa23.32■■□□□ 1.32
HTATSF1-202ENST00000425695 C17orf105B2RV13 164 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms