RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TCTN2Q96GX1 697 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 RNF145Q96MT1 663 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 BTBD9Q96Q07 612 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 NLNQ9BYT8 704 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 MS4A12Q9NXJ0 267 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SUSD2Q9UGT4 822 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PHF11Q9UIL8 331 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 FBXW2Q9UKT8 454 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 DAPP1Q9UN19 280 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 FAF1Q9UNN5 650 aaPredicted RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 SAMD4AQ9UPU9 718 aaKnown RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 RNF103-CHMP3A0A140T963 221 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 WASHC1A8K0Z3 465 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 HCRTR1O43613 425 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 TPST1O60507 370 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 PRKD3O94806 890 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 PRSS23O95084 383 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 ETFAP13804 333 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 CHI3L1P36222 383 aaPredicted RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 CRATP43155 626 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 BNIP3Q12983 259 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 SRSF5Q13243 272 aaKnown RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 NR1D2Q14995 579 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 NKG7Q16617 165 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 ZC3H12BQ5HYM0 836 aaKnown RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 PEAR1Q5VY43 1037 aaPredicted RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 DNAJC22Q8N4W6 341 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 OR5AK3PQ8NH89 298 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 FBXO30Q8TB52 745 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 C10orf90Q96M02 699 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 MAP3K3Q99759 626 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 YY1AP1Q9H869 796 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 LYRM4Q9HD34 91 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 DNAAF2Q9NVR5 837 aaKnown RBP14.37□□□□□ -0.11
ACTB-204ENST00000425660 ZSCAN32Q9NX65 697 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 RAPGEFL1Q9UHV5 662 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 RNF215Q9Y6U7 377 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 THADAQ6YHU6 1953 aa14.37□□□□□ -0.11
ACTB-204ENST00000425660 SLC9B1P1A6NJY1 282 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 GLOD5A6NK44 160 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 B3GALT2O43825 422 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 SRPX2O60687 465 aaPredicted RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 NR2F6P10588 404 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 GLB1P16278 677 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 NTSP30990 170 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 SOAT1P35610 550 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 BUD31P41223 144 aaPredicted RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 LIM2P55344 173 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 EEF1A2Q05639 463 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 HSPB3Q12988 150 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 INTS11Q5TA45 600 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 IRGCQ6NXR0 463 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ANGPTL8Q6UXH0 198 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 TMEM64Q6YI46 380 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 RNF130Q86XS8 419 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ICA1LQ8NDH6 482 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ZFP28Q8NHY6 868 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ZCCHC10Q8TBK6 192 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 PYURFQ96I23 114 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ZNF681Q96N22 645 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ZNF285Q96NJ3 590 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CD180Q99467 661 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 VCXQ9H320 206 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 EPB41L1Q9H4G0 881 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 IL21RQ9HBE5 538 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 LRIT1Q9P2V4 623 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 MRPS2Q9Y399 296 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 SNX8Q9Y5X2 465 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 V9GYQ6 96 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CACNA1EQ15878 2313 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 FAM149AA5PLN7 773 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 TLCD2A6NGC4 264 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 RHPN2P1A8MT19 583 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 TXNDC9O14530 226 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 GALR3O60755 368 aaPredicted RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 LDLRP01130 860 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 EIF2S1P05198 315 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 MAGEA2P43356 314 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 GPR3P46089 330 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CRYBA2P53672 197 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 VSX2P58304 361 aaPredicted RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 CSTF1Q05048 431 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 RUNX2Q13950 521 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 PRTGQ2VWP7 1150 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 GCNT6Q5T4J0 391 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 TLDC1Q6P9B6 456 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CBLL1Q75N03 491 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 SLC35F3Q8IY50 421 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CARFQ8N187 725 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 MAL2Q969L2 176 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 SLC47A1Q96FL8 570 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 ZC3H10Q96K80 434 aaKnown RBP14.36□□□□□ -0.11
ACTB-204ENST00000425660 CIB1Q99828 191 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 CCDC3Q9BQI4 270 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms