RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 OR8D2Q9GZM6 311 aa13.84□□□□□ -0.19
ATG4B-209ENST00000425239 LIME1Q9H400 295 aa13.84□□□□□ -0.19
ATG4B-209ENST00000425239 LYRM4Q9HD34 91 aa13.84□□□□□ -0.19
ATG4B-209ENST00000425239 ZNF358Q9NW07 568 aa13.84□□□□□ -0.19
ATG4B-209ENST00000425239 PTBP2Q9UKA9 531 aaKnown RBP13.84□□□□□ -0.19
ATG4B-209ENST00000425239 MRPS33Q9Y291 106 aaKnown RBP13.84□□□□□ -0.19
ATG4B-209ENST00000425239 MTO1Q9Y2Z2 717 aaKnown RBP13.84□□□□□ -0.19
ATG4B-209ENST00000425239 ATG4BQ9Y4P1 393 aa13.84□□□□□ -0.19
ATG4B-209ENST00000425239 ARHGAP21Q5T5U3 1957 aa13.83□□□□□ -0.19
ATG4B-209ENST00000425239 GOLGA6L10A0A0M3HER8 536 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 SYNDIG1LA6NDD5 238 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 NCF1BA6NI72 391 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 NCF1CA8MVU1 366 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 C17orf105B2RV13 164 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 IFNA16P05015 189 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 RFPL3SP0C7P2 107 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 NCF1P14598 390 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 HOXB4P17483 251 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 ATP5A1P25705 553 aaKnown RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 CASP2P42575 452 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 PLGLB1Q02325 96 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 OR4D1Q15615 310 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 CDKL4Q5MAI5 379 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 ZNF585AQ6P3V2 769 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 POMZP3Q6PJE2 187 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 B3GNT6Q6ZMB0 384 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 ACOT4Q8N9L9 421 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 ZNF473Q8WTR7 871 aaKnown RBP13.83□□□□□ -0.2
ATG4B-209ENST00000425239 CCT6BQ92526 530 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 KIAA1191Q96A73 305 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 VPS39Q96JC1 886 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 UBXN10Q96LJ8 280 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 FOXC2Q99958 501 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 MS4A8Q9BY19 250 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 RHOJQ9H4E5 214 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 DNAJC11Q9NVH1 559 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 SPRR3Q9UBC9 169 aa13.83□□□□□ -0.2
ATG4B-209ENST00000425239 A0A088AWK7 358 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 ACOT7O00154 380 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 HRKO00198 91 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 RTCAO00442 366 aaKnown RBP13.82□□□□□ -0.2
ATG4B-209ENST00000425239 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
ATG4B-209ENST00000425239 CD1DP15813 335 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 ZNF10P21506 573 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-209ENST00000425239 PIGAP37287 484 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 HSPA7P48741 367 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 PCDH1Q08174 1060 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 STX4Q12846 297 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 SLC10A1Q14973 349 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 TBCCQ15814 346 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 OPN5Q6U736 354 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 CLYBLQ8N0X4 340 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 FBXO36Q8NEA4 188 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 PAQR8Q8TEZ7 354 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 PTCD3Q96EY7 689 aaKnown RBP13.82□□□□□ -0.2
ATG4B-209ENST00000425239 SENP5Q96HI0 755 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-209ENST00000425239 KCNC2Q96PR1 638 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 CAB39LQ9H9S4 337 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 SACM1LQ9NTJ5 587 aa13.82□□□□□ -0.2
ATG4B-209ENST00000425239 NINQ8N4C6 2090 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 FREM3P0C091 2139 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 FIGNL2A6NMB9 653 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 CXorf49A8MYA2 514 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-209ENST00000425239 FGF17O60258 216 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 HCN1O60741 890 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 DIAPH2O60879 1101 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 WDR1O75083 606 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 STK16O75716 305 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 POU4F1Q01851 419 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 ID2Q02363 134 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 ASPHQ12797 758 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 SNTB1Q13884 538 aaKnown RBP13.81□□□□□ -0.2
ATG4B-209ENST00000425239 SERTAD2Q14140 314 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 ARSKQ6UWY0 536 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 FAM47EQ6ZV65 393 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 SYDE1Q6ZW31 735 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-209ENST00000425239 FRA10AC1Q70Z53 315 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 TMEM200AQ86VY9 491 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 OR4N5Q8IXE1 308 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 LAS2Q8IYD9 372 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 LRRC25Q8N386 305 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-209ENST00000425239 TCAIMQ8N3R3 496 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 PDPRQ8NCN5 879 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 OR5L2Q8NGL0 311 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 OR10Q1Q8NGQ4 319 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 NUBPLQ8TB37 319 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 CCM2LQ9NUG4 571 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-209ENST00000425239 PCDHGB3Q9Y5G1 929 aa13.81□□□□□ -0.2
ATG4B-209ENST00000425239 LRRC3CA6NJW4 275 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 KDM4EB2RXH2 506 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 SYT5O00445 386 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms