RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZNF525Q8N782 197 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF740Q8NDX6 193 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 STYXQ8WUJ0 223 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 ATL1Q8WXF7 558 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 P3H4Q92791 437 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 DAZLQ92904 295 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 MRPL24Q96A35 216 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 FAM136AQ96C01 138 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 HAUS1Q96CS2 278 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 MSI2Q96DH6 328 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 MARK4Q96L34 752 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 USB1Q9BQ65 265 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 RBM4Q9BWF3 364 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 CARD6Q9BX69 1037 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 GBA3Q9H227 469 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 METTL17Q9H7H0 456 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 PRM3Q9NNZ6 103 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 FANCFQ9NPI8 374 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 PRTFDC1Q9NRG1 225 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 TMEM184CQ9NVA4 438 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 CTTNBP2NLQ9P2B4 639 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 FEZ2Q9UHY8 353 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 PROCRQ9UNN8 238 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 R3HDM2Q9Y2K5 976 aaKnown RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 EPN1Q9Y6I3 576 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-203ENST00000424270 SVEP1Q4LDE5 3571 aa5.74□□□□□ -1.49
SDCBP-203ENST00000424270 IGKV3D-11A0A0A0MRZ8 115 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MYOCOSA0A1B0GUC4 107 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ESYT3A0FGR9 886 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MACROD2A1Z1Q3 448 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CCDC162PA2VCL2 907 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 LRRC14BA6NHZ5 514 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 H7C0C1 242 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 H7C0S8 307 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 KLF4O43474 513 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 OR1F1O43749 312 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 OR10H2O60403 315 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 TNFSF13O75888 250 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 GAS8O95995 478 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ACTL6AO96019 429 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 C1QAP02745 245 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 SAT1P21673 171 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CHMP24386 653 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 HRH2P25021 359 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 PTPN6P29350 595 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ATP5OP48047 213 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 NR2C2P49116 596 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MMP16P51512 607 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 RAB8AP61006 207 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CCZ1BP86790 482 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CCZ1P86791 482 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 STX4Q12846 297 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MSLNQ13421 630 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 TFDP2Q14188 446 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ARHGAP19Q14CB8 494 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 KRT31Q15323 416 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 AARS2Q5JTZ9 985 aaKnown RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CCDC181Q5TID7 509 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 DENND5AQ6IQ26 1287 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 SHQ1Q6PI26 577 aaKnown RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF474Q6S9Z5 364 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 AFTPHQ6ULP2 937 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 RANBP10Q6VN20 620 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 DNM1P46Q6ZS02 220 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF571Q7Z3V5 609 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 IRF2BP2Q7Z5L9 587 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 PEG10Q86TG7 708 aaKnown RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CPNE8Q86YQ8 564 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CILP2Q8IUL8 1156 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 OR10H5Q8NGA6 315 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 OR10G3Q8NGC4 313 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 OR14L1PQ8NHC6 308 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 RAB3IL1Q8TBN0 382 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 FAM216AQ8WUB2 273 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 KCTD4Q8WVF5 259 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 TP53INP1Q96A56 240 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 STARD4Q96DR4 205 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 SPACA9Q96E40 222 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 FAR2Q96K12 515 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 GNRHR2Q96P88 292 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 GAL3ST4Q96RP7 486 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 PKP4Q99569 1192 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 FAM129AQ9BZQ8 928 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 NGBQ9NPG2 151 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CCDC177Q9NQR7 707 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MOCS1Q9NZB8 636 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 CHMP5Q9NZZ3 219 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 TMEFF2Q9UIK5 374 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MRPS33Q9Y291 106 aaKnown RBP5.73□□□□□ -1.49
SDCBP-203ENST00000424270 MMACHCQ9Y4U1 282 aa5.73□□□□□ -1.49
SDCBP-203ENST00000424270 KCNE1BA0A087WTH5 132 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 URADA6NGE7 173 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 FRG2CA6NGY1 282 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 SLC22A20A6NK97 555 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 ELOA3DA6NLF2 546 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-203ENST00000424270 LRRC53A6NM62 1247 aa5.72□□□□□ -1.49
SDCBP-203ENST00000424270 C17orf105B2RV13 164 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms