RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 UGT1A5P35504 534 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GNPDA1P46926 289 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 POLD2P49005 469 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ACADVLP49748 655 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF140P52738 457 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 BASP1P80723 227 aaKnown RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 XIAPP98170 497 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 CACNG1Q06432 222 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TMEM115Q12893 351 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 OLIG2Q13516 323 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 KCNJ11Q14654 390 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 DEFB133Q30KQ1 61 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ATP13A5Q4VNC0 1218 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ENTPD8Q5MY95 495 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ALS2CLQ60I27 953 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TTC27Q6P3X3 843 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 LRRC8BQ6P9F7 803 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 DOK6Q6PKX4 331 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SNX20Q7Z614 316 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ADGRG6Q86SQ4 1221 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PRUNE1Q86TP1 453 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 NRROSQ86YC3 692 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GALNT13Q8IUC8 556 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ARL10Q8N8L6 244 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 Q8N9P0 234 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 AVL9Q8NBF6 648 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PCYOX1LQ8NBM8 494 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 DDHD1Q8NEL9 900 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 OR4K2Q8NGD2 314 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GDAP1Q8TB36 358 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ASB5Q8WWX0 329 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SLCO2A1Q92959 643 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PDXPQ96GD0 296 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF514Q96K75 400 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TTC25Q96NG3 672 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TRMOQ9BU70 441 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 FAM234AQ9H0X4 552 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 OR2AG1Q9H205 316 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ASB8Q9H765 288 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 UGT1A7Q9HAW7 530 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 UGT1A10Q9HAW8 530 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 UGT1A8Q9HAW9 530 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 XAB2Q9HCS7 855 aaKnown RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SPAG4Q9NPE6 437 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 MRPL40Q9NQ50 206 aaKnown RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ATXN10Q9UBB4 475 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ARL5AQ9Y689 179 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 CABIN1Q9Y6J0 2220 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TRBV5-4A0A0C4DH59 114 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 IGLV5-39A0A0G2JS06 123 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 C17orf113A0A1B0GUU1 675 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 MED19A0JLT2 244 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 CPED1A4D0V7 1026 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SDR42E2A6NKP2 422 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 A6NLC8 198 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 FOXO6A8MYZ6 492 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TMX2-CTNND1H3BSU7 103 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 KIF2AO00139 706 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GAPDHSO14556 408 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 NDC80O14777 642 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 KLK10O43240 276 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 NEURL1O76050 574 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 AP2A2O94973 939 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 NTN1O95631 604 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 RALBP11234 206 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF7P17097 686 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF8P17098 575 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 VCLP18206 1134 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 MSH3P20585 1137 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 IDSP22304 550 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PPARGP37231 505 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ACTR1BP42025 376 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GRIA1P42261 906 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ACTR1AP61163 376 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ACVR1Q04771 509 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SRSF1Q07955 248 aaKnown RBP eCLIP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 NFATC2Q13469 925 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PTK6Q13882 451 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TUBB2AQ13885 445 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ITIH4Q14624 930 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PTPRCAPQ14761 206 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 POU6F1Q14863 301 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 PPP1R7Q15435 360 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TRIP13Q15645 432 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 CLPPQ16740 277 aaPredicted RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 C14orf28Q4W4Y0 310 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 ZRANB3Q5FWF4 1079 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 MANEAQ5SRI9 462 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 GPRC6AQ5T6X5 926 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 LYPLAL1Q5VWZ2 237 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 KCTD16Q68DU8 428 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 IYDQ6PHW0 289 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TMEM220Q6QAJ8 160 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 FAM151BQ6UXP7 276 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 WASH2PQ6VEQ5 465 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 SYT10Q6XYQ8 523 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 CERS6Q6ZMG9 384 aa2.4□□□□□ -2.03
VPS13A-208ENST00000423463 MARK2Q7KZI7 788 aaKnown RBP2.4□□□□□ -2.03
VPS13A-208ENST00000423463 TAS2R42Q7RTR8 314 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms