RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RBPJQ06330 500 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 PCDH1Q08174 1060 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 IFFO1Q0D2I5 559 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 DDX39BQ13838 428 aaKnown RBP14.14□□□□□ -0.15
USB1-202ENST00000423271 SETDB1Q15047 1291 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 ELAVL1Q15717 326 aaKnown RBP14.14□□□□□ -0.15
USB1-202ENST00000423271 C3AR1Q16581 482 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 PFKFB4Q16877 469 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 TSNAXIP1Q2TAA8 658 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 KLC3Q6P597 504 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 FAM98AQ8NCA5 519 aaKnown RBP14.14□□□□□ -0.15
USB1-202ENST00000423271 ITLN2Q8WWU7 325 aaPredicted RBP14.14□□□□□ -0.15
USB1-202ENST00000423271 UBE2E3Q969T4 207 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 TBCDQ9BTW9 1192 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 OR51B5Q9H339 312 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 LYRM4Q9HD34 91 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 XPR1Q9UBH6 696 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 TINAGQ9UJW2 476 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 CCDC189A1A4V9 331 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 TMEM200CA6NKL6 621 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 CDK2AP1O14519 115 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 KLK8O60259 260 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 SCELO95171 688 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 PYGBP11216 843 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 GFAPP14136 432 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 ZNF24P17028 368 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 KRT15P19012 456 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 HIST1H1TP22492 207 aaPredicted RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 RFC3P40938 356 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 SSR2P43308 183 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 GTF3C1Q12789 2109 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 STX4Q12846 297 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 RCN2Q14257 317 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 TMEM35AQ53FP2 167 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 KHDRBS2Q5VWX1 349 aaKnown RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 MYLK4Q86YV6 388 aaPredicted RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 CYP4Z2PQ8N1L4 340 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 ZNF321PQ8N8H1 164 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 SRFBP1Q8NEF9 429 aaKnown RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 HUS1BQ8NHY5 278 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 ACMSDQ8TDX5 336 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 PTPMT1Q8WUK0 201 aaPredicted RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 TMEM125Q96AQ2 219 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 CMTM7Q96FZ5 175 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 MAGED4Q96JG8 741 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 ALOXE3Q9BYJ1 711 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 ROGDIQ9GZN7 287 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 DMRT3Q9NQL9 472 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 CPSF2Q9P2I0 782 aaKnown RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 SUCOQ9UBS9 1254 aaKnown RBP14.13□□□□□ -0.15
USB1-202ENST00000423271 ANGPTL3Q9Y5C1 460 aa14.13□□□□□ -0.15
USB1-202ENST00000423271 SIX3O95343 332 aaPredicted RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 RBP1P09455 135 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 SERPINB1P30740 379 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 MEOX1P50221 254 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 ALDH18A1P54886 795 aaKnown RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.12□□□□□ -0.15
USB1-202ENST00000423271 AP5B1Q2VPB7 878 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 KRTCAP3Q53RY4 240 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 DEPDC1Q5TB30 811 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 CHSY3Q70JA7 882 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 MDGA2Q7Z553 956 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 GOLGA7Q7Z5G4 137 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 CHERPQ8IWX8 916 aaKnown RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 TMEM132CQ8N3T6 1108 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 RIBC1Q8N443 379 aaPredicted RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 TMEM156Q8N614 296 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 ANKRD9Q96BM1 317 aaPredicted RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 MTERF1Q99551 399 aaKnown RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 ROPN1BQ9BZX4 212 aaPredicted RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 OR8D2Q9GZM6 311 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 ACTR8Q9H981 624 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 ROPN1Q9HAT0 212 aaPredicted RBP14.12□□□□□ -0.15
USB1-202ENST00000423271 VTI1BQ9UEU0 232 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 ZNF835Q9Y2P0 537 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 CLCA3PQ9Y6N3 262 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 CSMD1Q96PZ7 3565 aa14.12□□□□□ -0.15
USB1-202ENST00000423271 NCOA6Q14686 2063 aaPredicted RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 MYO9AB2RTY4 2548 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 ABCA12Q86UK0 2595 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 CCDC151A5D8V7 595 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 C17orf105B2RV13 164 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 PRSS44E7EML9 344 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 PLPP1O14494 284 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 ASNA1O43681 348 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 FGF17O60258 216 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 ERLIN1O75477 346 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 PRKRAO75569 313 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 OR2J2O76002 312 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 ZFAND5O76080 213 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 MLYCDO95822 493 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 CPN2P22792 545 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 GRNP28799 593 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 PTGER1P34995 402 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 SSR4P51571 173 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 GPR85P60893 370 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 RPS13P62277 151 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 ADORA2A-AS1P86434 159 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 GTF2H2Q13888 395 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms