RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OPN5Q6U736 354 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 FAM47EQ6ZV65 393 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 LRRC70Q7Z2Q7 622 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 FAM109AQ8N4B1 249 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 RPRMLQ8N4K4 120 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 GOLM1Q8NBJ4 401 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 PDPRQ8NCN5 879 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 OR5L2Q8NGL0 311 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 OR8K3Q8NH51 312 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 LILRB4Q8NHJ6 448 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 PTPMT1Q8WUK0 201 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-205ENST00000423214 UBE2E3Q969T4 207 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 WDR34Q96EX3 536 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 GPR22Q99680 433 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 RBBP8Q99708 897 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 CPNE1Q99829 537 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 MCMBPQ9BTE3 642 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 PHACTR1Q9C0D0 580 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 ZDHHC11Q9H8X9 412 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 SMYD2Q9NRG4 433 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 SACM1LQ9NTJ5 587 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 WHRNQ9P202 907 aa14.97□□□□□ -0.01
COL18A1-205ENST00000423214 ZNF490Q9ULM2 529 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-205ENST00000423214 SPG11Q96JI7 2443 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 BCKDKO14874 412 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 DYRK3O43781 588 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 PRAMEF4O60810 478 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 WISP3O95389 354 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-205ENST00000423214 CD22P20273 847 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 CPN2P22792 545 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 MSX1P28360 303 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 SSTR1P30872 391 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 GP5P40197 560 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 MAGEA5P43359 124 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ID2Q02363 134 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 PMPCAQ10713 525 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ZNF750Q32MQ0 723 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 PRAMEF9Q5VWM5 478 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ZNF585AQ6P3V2 769 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ZNF793Q6ZN11 406 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 TMEM200AQ86VY9 491 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 CCDC71Q8IV32 467 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ZNF321PQ8N8H1 164 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 ACOT4Q8N9L9 421 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 C7orf57Q8NEG2 295 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 OR5M9Q8NGP3 310 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 OR10Q1Q8NGQ4 319 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 SCYL1Q96KG9 808 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 DGAT2Q96PD7 388 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 MAPKAP1Q9BPZ7 522 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 TBCDQ9BTW9 1192 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 MS4A8Q9BY19 250 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 UCK2Q9BZX2 261 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 IL1RL2Q9HB29 575 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 PRDM7Q9NQW5 492 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 NPDC1Q9NQX5 325 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-205ENST00000423214 PNPLA3Q9NST1 481 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 GRHL1Q9NZI5 618 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 HRH3Q9Y5N1 445 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 LIPGQ9Y5X9 500 aa14.96□□□□□ -0.01
COL18A1-205ENST00000423214 OR14I1A6ND48 311 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 CXorf49A8MYA2 514 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SUPT3HB4E1H0 165 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 RTCAO00442 366 aaKnown RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SH3BGRLO75368 114 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SUPT3HO75486 399 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 IGFBP2P18065 325 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 CNR1P21554 472 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 HIST1H1TP22492 207 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 ATP5A1P25705 553 aaKnown RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 ACVR2AP27037 513 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SERPINB1P30740 379 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 NR0B1P51843 470 aaKnown RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 RAP1GDS1P52306 607 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 PLTPP55058 493 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 RAB10P61026 200 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SLMAPQ14BN4 828 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 TBCCQ15814 346 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 AP5B1Q2VPB7 878 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 TMEM35AQ53FP2 167 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 EMC4Q5J8M3 183 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 MED27Q6P2C8 311 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 B3GNT6Q6ZMB0 384 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 RAPH1Q70E73 1250 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 CTAGE3PQ8IX95 158 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 TMEM251Q8N6I4 163 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SLC22A8Q8TCC7 542 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 ART5Q96L15 291 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 SGCZQ96LD1 299 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 ZNF559Q9BR84 538 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 CENPKQ9BS16 269 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 CD244Q9BZW8 370 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 LDAHQ9H6V9 325 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 EXO5Q9H790 373 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 NUDT4Q9NZJ9 180 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 OPTCQ9UBM4 332 aa14.95□□□□□ -0.02
COL18A1-205ENST00000423214 PTBP2Q9UKA9 531 aaKnown RBP14.95□□□□□ -0.02
COL18A1-205ENST00000423214 EIF3HO15372 352 aaKnown RBP eCLIP14.94□□□□□ -0.023e-18■□□□□ 10.3
COL18A1-205ENST00000423214 TOXO94900 526 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms