RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GPR180Q86V85 440 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 ZCCHC7Q8N3Z6 543 aaKnown RBP20.44■□□□□ 0.86
TRAF4-204ENST00000422344 WDR20Q8TBZ3 569 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 DAZLQ92904 295 aaKnown RBP20.44■□□□□ 0.86
TRAF4-204ENST00000422344 NCLNQ969V3 563 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 MTFMTQ96DP5 389 aaKnown RBP20.44■□□□□ 0.86
TRAF4-204ENST00000422344 SIGLEC12Q96PQ1 595 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 FRG2BQ96QU4 278 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 TAAR6Q96RI8 345 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 SERPINI1Q99574 410 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 EPB41L4BQ9H329 900 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 ELOVL6Q9H5J4 265 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 ZBTB26Q9HCK0 441 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 KLHL1Q9NR64 748 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 PSD3Q9NYI0 1048 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 TMEM216Q9P0N5 145 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 CLDN16Q9Y5I7 305 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 POLEQ07864 2286 aa20.44■□□□□ 0.86
TRAF4-204ENST00000422344 MYOCOSA0A1B0GUC4 107 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 TNFRSF8P28908 595 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 BUD31P41223 144 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 MLF1P58340 268 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 TRAF3Q13114 568 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 SPINK14Q6IE38 97 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 NUDT13Q86X67 352 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 TMEM178AQ8NBL3 297 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 APCDD1LQ8NCL9 501 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 MDS2Q8NDY4 140 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 OR4F6Q8NGB9 312 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 OR14A16Q8NHC5 309 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 DNAJB8Q8NHS0 232 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 ZNF483Q8TF39 744 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 THAP3Q8WTV1 239 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 NR4A3Q92570 626 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 SLX1AQ9BQ83 275 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 RPF2Q9H7B2 306 aaKnown RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 LYARQ9NX58 379 aaKnown RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 VTI1BQ9UEU0 232 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 PPIEQ9UNP9 301 aaKnown RBP20.43■□□□□ 0.86
TRAF4-204ENST00000422344 PCDHGB6Q9Y5F9 930 aa20.43■□□□□ 0.86
TRAF4-204ENST00000422344 GSTA1P08263 222 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 SBK3P0C264 359 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 PYGBP11216 843 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 COX7A2P14406 83 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 CYB561P49447 251 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 CDH13P55290 713 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 HERVK_113P63132 956 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 TNFRSF17Q02223 184 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 ID2Q02363 134 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 GGTA1PQ4G0N0 100 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 TMEM151AQ8N4L1 468 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 MORN4Q8NDC4 146 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 C1QTNF3Q9BXJ4 246 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 ERVK-6Q9BXR3 956 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 PPCSQ9HAB8 311 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 PPT2Q9UMR5 302 aa20.42■□□□□ 0.86
TRAF4-204ENST00000422344 C17orf105B2RV13 164 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 DYRK3O43781 588 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 ZFAND5O76080 213 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 SUPT7LO94864 414 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 SEMA3DO95025 777 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 ETHE1O95571 254 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 TSPAN8P19075 237 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 SGO1Q5FBB7 561 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 RPS27LQ71UM5 84 aaKnown RBP20.41■□□□□ 0.86
TRAF4-204ENST00000422344 FAM98AQ8NCA5 519 aaKnown RBP20.41■□□□□ 0.86
TRAF4-204ENST00000422344 TANKQ92844 425 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 TMEM125Q96AQ2 219 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 OR8D2Q9GZM6 311 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 DDX31Q9H8H2 851 aaKnown RBP20.41■□□□□ 0.86
TRAF4-204ENST00000422344 WDR41Q9HAD4 459 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 AHSPQ9NZD4 102 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 DCDC2Q9UHG0 476 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 SNX6Q9UNH7 406 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 ATG4BQ9Y4P1 393 aa20.41■□□□□ 0.86
TRAF4-204ENST00000422344 A0A0A6YYD5 115 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SMIM23A6NLE4 172 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 FGF17O60258 216 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 EEDO75530 441 aaKnown RBP20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SLC25A12O75746 678 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SHBGP04278 402 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SP1P08047 785 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 FAM58BPP0C7Q3 252 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 KRT15P19012 456 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 ATP5F1P24539 256 aaPredicted RBP20.4■□□□□ 0.86
TRAF4-204ENST00000422344 BSGP35613 385 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SLCO1A2P46721 670 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 HLCSP50747 726 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 HNRNPH2P55795 449 aaKnown RBP20.4■□□□□ 0.86
TRAF4-204ENST00000422344 CLCQ05315 142 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SLC25A25Q6KCM7 469 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 HSDL2Q6YN16 418 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 SLC22A9Q8IVM8 553 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 OR4N5Q8IXE1 308 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 TMEM156Q8N614 296 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 TRPC4APQ8TEL6 797 aa20.4■□□□□ 0.86
TRAF4-204ENST00000422344 PTPMT1Q8WUK0 201 aaPredicted RBP20.4■□□□□ 0.86
TRAF4-204ENST00000422344 ANKRD9Q96BM1 317 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms