RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 OR10G6Q8NH81 332 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 C16orf58Q96GQ5 468 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 CNPPD1Q9BV87 410 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 NMNAT1Q9HAN9 279 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 NDRG4Q9ULP0 352 aaKnown RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 PMF1-BGLAPU3KQ54 211 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 FUOMA2VDF0 154 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 SLC9A3R1O14745 358 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 PI15O43692 258 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 GPR37L1O60883 481 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 PBX2P40425 430 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 MVDP53602 400 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TSPYL5Q86VY4 417 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 KRT78Q8N1N4 520 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF707Q96C28 371 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ART5Q96L15 291 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TMCC3Q9ULS5 477 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 PGRMC2O15173 223 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 PDPK1O15530 556 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 JRKO75564 520 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 CCNB2O95067 398 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 CDH3P22223 829 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 MAGEA2P43356 314 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 CCT3P49368 545 aaKnown RBP12.7□□□□□ -0.38
MCF2L-213ENST00000421756 LIM2P55344 173 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 DTX3Q8N9I9 347 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 POC5Q8NA72 575 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF675Q8TD23 568 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 C1GALT1Q9NS00 363 aa12.7□□□□□ -0.38
MCF2L-213ENST00000421756 TMEM229AB2RXF0 380 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 NDUFS4O43181 175 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 GDI1P31150 447 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 RYKP34925 604 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 GJA8P48165 433 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF614Q8N883 585 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 FAM83FQ8NEG4 500 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 COQ10AQ96MF6 247 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ANGPT4Q9Y264 503 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CARD8Q9Y2G2 431 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 SNRNP200O75643 2136 aaKnown RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TLX2O43763 284 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 DDX5P17844 614 aaKnown RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ITIH1P19827 911 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 AVPR1BP47901 424 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ELP6Q0PNE2 266 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 SGCGQ13326 291 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 GPM6BQ13491 265 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 PUM1Q14671 1186 aaKnown RBP eCLIP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 SEC23BQ15437 767 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 C18orf63Q68DL7 685 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TMEM107Q6UX40 140 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 SLC9B2Q86UD5 537 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 LRRTM4Q86VH4 590 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TERB1Q8NA31 727 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 SIMC1Q8NDZ2 872 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 OR52N2Q8NGI0 321 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 RDH12Q96NR8 316 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TUBA1CQ9BQE3 449 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CLDN24A6NM45 220 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 KDM1AO60341 852 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 ADRA2AP08913 450 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CDK3Q00526 305 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TMEM240Q5SV17 173 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CCL4L1Q8NHW4 92 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 INSM2Q96T92 566 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-213ENST00000421756 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 CDH7Q9ULB5 785 aa12.69□□□□□ -0.38
MCF2L-213ENST00000421756 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 QSOX1O00391 747 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ENTPD6O75354 484 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KAT7O95251 611 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 PTX3P26022 381 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TFF2Q03403 129 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 Q6ZNX1 250 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SFTPA2Q8IWL1 248 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TP53INP1Q96A56 240 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 PPP1R16AQ96I34 528 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 DPH7Q9BTV6 452 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 EHD1Q9H4M9 534 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 DUSP21Q9H596 190 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 WDR26Q9H7D7 661 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms