RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 GLOD5A6NK44 160 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 HEXBP07686 556 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 UMODP07911 640 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 CYC1P08574 325 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 ALDOCP09972 364 aaKnown RBP16.5■□□□□ 0.23
LINC00271-201ENST00000421378 G6PDP11413 515 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 ASMTP46597 345 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 ALDH9A1P49189 494 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 DIO3P55073 304 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 FOXK2Q01167 660 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 RHAGQ02094 409 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 SLC13A2Q13183 592 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 PTGR1Q14914 329 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 OR52E8Q6IFG1 317 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 PROSER1Q86XN7 944 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 TMEM151BQ8IW70 566 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 MMP21Q8N119 569 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 CLHC1Q8NHS4 586 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 ZCCHC14Q8WYQ9 949 aaKnown RBP16.5■□□□□ 0.23
LINC00271-201ENST00000421378 STARD8Q92502 1023 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 EGLN2Q96KS0 407 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 DCBLD2Q96PD2 775 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 FAM107BQ9H098 131 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 PRDM9Q9NQV7 894 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 PRTFDC1Q9NRG1 225 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 MMACHCQ9Y4U1 282 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 PCDHA9Q9Y5H5 950 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 ACACAQ13085 2346 aa16.5■□□□□ 0.23
LINC00271-201ENST00000421378 CCDC88CQ9P219 2028 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 TMEM8BA6NDV4 472 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 E9PBE3 544 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 KLHL41O60662 606 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 DRD2P14416 443 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 MAOAP21397 527 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 PPP2R1BP30154 601 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 EMP2P54851 167 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 BTG2P78543 158 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SF3A3Q12874 501 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SRSF6Q13247 344 aaKnown RBP16.49■□□□□ 0.23
LINC00271-201ENST00000421378 CLNKQ7Z7G1 428 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SCUBE1Q8IWY4 988 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 TANKQ92844 425 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SLC45A3Q96JT2 553 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 RILPQ96NA2 401 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 PTCHD1Q96NR3 888 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 CCNL2Q96S94 520 aaPredicted RBP16.49■□□□□ 0.23
LINC00271-201ENST00000421378 CCDC28BQ9BUN5 200 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 TMEM120AQ9BXJ8 343 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 MIEF1Q9NQG6 463 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SEMA3GQ9NS98 782 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 HEY2Q9UBP5 337 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 RAXQ9Y2V3 346 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 IGF2RP11717 2491 aa16.49■□□□□ 0.23
LINC00271-201ENST00000421378 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 PGRMC2O15173 223 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 UBDO15205 165 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 LDB3O75112 727 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 CREG1O75629 220 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 RECKO95980 971 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 C8orf89P0DMQ9 161 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 IDO1P14902 403 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 DDCP20711 480 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 EFNA3P52797 238 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 MC1RQ01726 317 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 C2orf80Q0P641 193 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 SSPNQ14714 243 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 NSDHLQ15738 373 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 TMEM198Q66K66 360 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 FAM71E1Q6IPT2 247 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 SLC48A1Q6P1K1 146 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 CPLX4Q7Z7G2 160 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 SPACA3Q8IXA5 215 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 FAM9CQ8IZT9 166 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 METTL21AQ8WXB1 218 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 GFM2Q969S9 779 aaKnown RBP16.48■□□□□ 0.23
LINC00271-201ENST00000421378 AIG1Q9NVV5 245 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 C5AR2Q9P296 337 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 CHD8Q9HCK8 2581 aa16.48■□□□□ 0.23
LINC00271-201ENST00000421378 FGF17O60258 216 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 SHOX2O60902 331 aaPredicted RBP16.47■□□□□ 0.23
LINC00271-201ENST00000421378 CTNSO60931 367 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 ALOX12BO75342 701 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 LRATO95237 230 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 MMP11P24347 488 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 ARFIP2P53365 341 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 FOLH1Q04609 750 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 STX4Q12846 297 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 IL10RAQ13651 578 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 FAAH2Q6GMR7 532 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 LRRC69Q6ZNQ3 347 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 PLPP5Q8NEB5 264 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 DNAJB14Q8TBM8 379 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 TSLPQ969D9 159 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 UCN3Q969E3 161 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 MARK4Q96L34 752 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 EHD3Q9NZN3 535 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 IGKV3D-11A0A0A0MRZ8 115 aa16.47■□□□□ 0.23
LINC00271-201ENST00000421378 WASHC1A8K0Z3 465 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms