RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 KCNK10P57789 538 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 SRSF11Q05519 484 aaKnown RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 BIKQ13323 160 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 SLC29A2Q14542 456 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 MAPKAPK3Q16644 382 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 C10orf62Q5T681 223 aaPredicted RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 FAM98AQ8NCA5 519 aaKnown RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 TMEM125Q96AQ2 219 aa15.34■□□□□ 0.05
LINC00404-201ENST00000418660 NSUN5Q96P11 429 aaKnown RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 ZNF717Q9BY31 904 aaPredicted RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 RPF2Q9H7B2 306 aaKnown RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 DDX31Q9H8H2 851 aaKnown RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
LINC00404-201ENST00000418660 IQANK1A0A1B0GTG1 560 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 C17orf105B2RV13 164 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 PRKNO60260 465 aaPredicted RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 NME2P1O60361 137 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 ETHE1O95571 254 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 MLYCDO95822 493 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 RPS17P08708 135 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 NME2P22392 152 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 TLX1P31314 330 aaPredicted RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 BSGP35613 385 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 HNRNPH2P55795 449 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 PER3P56645 1201 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 IGLV3-21P80748 117 aaPredicted RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 TNFRSF17Q02223 184 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 ID2Q02363 134 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 TRAF3Q13114 568 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 GGTA1PQ4G0N0 100 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 FRG2Q64ET8 278 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 MRM1Q6IN84 353 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 HSDL2Q6YN16 418 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 MILR1Q7Z6M3 343 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 LCA5Q86VQ0 697 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 TMEM156Q8N614 296 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 EIF1ADQ8N9N8 165 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 TANKQ92844 425 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 MTFMTQ96DP5 389 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 FRMD6Q96NE9 622 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 FRG2BQ96QU4 278 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 SERPINI1Q99574 410 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 C1QTNF3Q9BXJ4 246 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 SEMA4BQ9NPR2 832 aaPredicted RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 LYARQ9NX58 379 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 YARS2Q9Y2Z4 477 aaKnown RBP15.33■□□□□ 0.04
LINC00404-201ENST00000418660 ATG4BQ9Y4P1 393 aa15.33■□□□□ 0.04
LINC00404-201ENST00000418660 A0A0A6YYD5 115 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 TMEM200CA6NKL6 621 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 A8MT66 165 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 PROM1O43490 865 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 FGF17O60258 216 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 EEDO75530 441 aaKnown RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 SEMA3DO95025 777 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 TAC1P20366 129 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 BUD31P41223 144 aaPredicted RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 STT3AP46977 705 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 ALDH6A1Q02252 535 aaKnown RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 KRTCAP3Q53RY4 240 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 C18orf63Q68DL7 685 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 TTC19Q6DKK2 380 aaPredicted RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 CYP20A1Q6UW02 462 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 NUDT13Q86X67 352 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 OR4N5Q8IXE1 308 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 OR4F6Q8NGB9 312 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 OR8K3Q8NH51 312 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 SLC2A12Q8TD20 617 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 ZNF483Q8TF39 744 aaPredicted RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 RELTQ969Z4 430 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 DGAT2Q96PD7 388 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 OR8D2Q9GZM6 311 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 EPB41L4BQ9H329 900 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 TMEM216Q9P0N5 145 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 PSMC3IPQ9P2W1 217 aaPredicted RBP15.32■□□□□ 0.04
LINC00404-201ENST00000418660 MYOTQ9UBF9 498 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 ASB4Q9Y574 426 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 HIVEP3Q5T1R4 2406 aa15.32■□□□□ 0.04
LINC00404-201ENST00000418660 COL12A1Q99715 3063 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 POLEQ07864 2286 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 A1L4Q6 167 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 TMPRSS11DO60235 418 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 WISP2O76076 250 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 OTCP00480 354 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 FAM58BPP0C7Q3 252 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 COX7A2P14406 83 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 SSR4P51571 173 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 FOLH1Q04609 750 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 RBPJQ06330 500 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 IFT88Q13099 833 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.31■□□□□ 0.04
LINC00404-201ENST00000418660 C1QL3Q5VWW1 255 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 RPS27LQ71UM5 84 aaKnown RBP15.31■□□□□ 0.04
LINC00404-201ENST00000418660 GPALPP1Q8IXQ4 340 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 CYP4Z2PQ8N1L4 340 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 ZNF321PQ8N8H1 164 aa15.31■□□□□ 0.04
LINC00404-201ENST00000418660 MYRIPQ8NFW9 859 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms