RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZNF98A6NK75 572 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC30A4O14863 429 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PTP4A3O75365 173 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CLDN9O95484 217 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SMPD1P17405 629 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 POU1F1P28069 291 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ADAM15Q13444 863 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 GNA13Q14344 377 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF235Q14590 738 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CCDC85BQ15834 202 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 LRFN4Q6PJG9 635 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 QSOX2Q6ZRP7 698 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 C11orf65Q8NCR3 313 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 C1GALT1C1Q96EU7 318 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CMTM7Q96FZ5 175 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ATF6BQ99941 703 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 TMEM175Q9BSA9 504 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 C1QTNF6Q9BXI9 259 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 FAM126AQ9BYI3 521 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 P2RY12Q9H244 342 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 C11orf16Q9NQ32 467 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 FKBPLQ9UIM3 349 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 EXO1Q9UQ84 846 aaKnown RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PRELID3BQ9Y3B1 194 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SF3B6Q9Y3B4 125 aaKnown RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SPIN1Q9Y657 262 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 A0A1B0GVI7 797 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 KRBOX1C9JBD0 128 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 KPNA5O15131 536 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CPSF4O95639 269 aaKnown RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 GASTP01350 101 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OPN1SWP03999 348 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CHRM5P08912 532 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ACPPP15309 386 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 FGF9P31371 208 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PGFP49763 221 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CTBP2P56545 445 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 RPS25P62851 125 aaKnown RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ARHGAP15Q53QZ3 475 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CHMP1BQ7LBR1 199 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 KIAA0907Q7Z7F0 614 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 LAPTM4BQ86VI4 370 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OR8J2Q8NGG1 315 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SELENOMQ8WWX9 145 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 APIPQ96GX9 242 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SENP5Q96HI0 755 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PCDHB16Q9NRJ7 776 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CPA4Q9UI42 421 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 GSTK1Q9Y2Q3 226 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SESN1Q9Y6P5 492 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ARPC4-TTLL3A0A0A6YYG9 625 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC22A23A1A5C7 686 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 J3KTA2 159 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 AVPR1BP47901 424 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 SERINC3Q13530 473 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 ZRANB3Q5FWF4 1079 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 BHLHB9Q6PI77 547 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OR8D4Q8NGM9 314 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OR2T4Q8NH00 348 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OTUB1Q96FW1 271 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OR2M2Q96R28 347 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 COPS8Q99627 209 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PIP5K1AQ99755 562 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 TSSK6Q9BXA6 273 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 RBCK1Q9BYM8 510 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 MS4A7Q9GZW8 240 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 OR51J1Q9H342 316 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CPNE7Q9UBL6 633 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CACNG4Q9UBN1 327 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 CORO2BQ9UQ03 480 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 PTPRDP23468 1912 aa7.66□□□□□ -1.18
HMGXB4-202ENST00000418170 GLYATL1P3A0A0U1RQE8 302 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PTGESO14684 152 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 CASKO14936 926 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PRMT3O60678 531 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NBNO60934 754 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 GPR32O75388 356 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 GADD45GO95257 159 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 LALBAP00709 142 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 LPOP22079 712 aaPredicted RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 DNASE1P24855 282 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 XCR1P46094 333 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 DSG2Q14126 1118 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 RGNQ15493 299 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 ATAT1Q5SQI0 421 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 ALG1LQ6GMV1 187 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 RETSATQ6NUM9 610 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 MICALL2Q8IY33 904 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 APOLD1Q96LR9 279 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 FOPNLQ96NB1 174 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 C16orf70Q9BSU1 422 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 APOL5Q9BWW9 433 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 RAB23Q9ULC3 237 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 COPS3Q9UNS2 423 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 BAIAP2Q9UQB8 552 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 MYO16Q9Y6X6 1858 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 C1orf226A1L170 272 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NPIPB8E9PQR5 432 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms